Protein–RNA interactions for Protein: Q9Y5W9

SNX11, Sorting nexin-11, humanhuman

Predictions only

Length 270 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX11Q9Y5W9 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC17.65■□□□□ 0.42
SNX11Q9Y5W9 NKAPP1-205ENST00000585790 367 ntBASIC17.65■□□□□ 0.42
SNX11Q9Y5W9 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC17.65■□□□□ 0.42
SNX11Q9Y5W9 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
SNX11Q9Y5W9 FAM197Y3-203ENST00000618346 717 ntBASIC17.65■□□□□ 0.42
SNX11Q9Y5W9 AL139288.1-201ENST00000623748 933 ntBASIC17.65■□□□□ 0.42
SNX11Q9Y5W9 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
SNX11Q9Y5W9 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SNX11Q9Y5W9 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
SNX11Q9Y5W9 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
SNX11Q9Y5W9 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SNX11Q9Y5W9 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
SNX11Q9Y5W9 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SNX11Q9Y5W9 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SNX11Q9Y5W9 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
SNX11Q9Y5W9 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
SNX11Q9Y5W9 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
SNX11Q9Y5W9 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
SNX11Q9Y5W9 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
SNX11Q9Y5W9 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.42
SNX11Q9Y5W9 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC17.64■□□□□ 0.41
SNX11Q9Y5W9 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
SNX11Q9Y5W9 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
SNX11Q9Y5W9 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC17.64■□□□□ 0.41
SNX11Q9Y5W9 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
SNX11Q9Y5W9 LBH-204ENST00000406087 559 ntTSL 4 BASIC17.64■□□□□ 0.41
SNX11Q9Y5W9 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC17.64■□□□□ 0.41
SNX11Q9Y5W9 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC17.64■□□□□ 0.41
SNX11Q9Y5W9 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC17.64■□□□□ 0.41
SNX11Q9Y5W9 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC17.64■□□□□ 0.41
SNX11Q9Y5W9 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC17.64■□□□□ 0.41
SNX11Q9Y5W9 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC17.64■□□□□ 0.41
SNX11Q9Y5W9 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
SNX11Q9Y5W9 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
SNX11Q9Y5W9 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC17.64■□□□□ 0.41
SNX11Q9Y5W9 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
SNX11Q9Y5W9 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
SNX11Q9Y5W9 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC17.64■□□□□ 0.41
SNX11Q9Y5W9 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
SNX11Q9Y5W9 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
SNX11Q9Y5W9 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC17.64■□□□□ 0.41
SNX11Q9Y5W9 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC17.64■□□□□ 0.41
SNX11Q9Y5W9 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
SNX11Q9Y5W9 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
SNX11Q9Y5W9 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC17.63■□□□□ 0.41
SNX11Q9Y5W9 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC17.63■□□□□ 0.41
SNX11Q9Y5W9 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
SNX11Q9Y5W9 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
SNX11Q9Y5W9 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC17.63■□□□□ 0.41
SNX11Q9Y5W9 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
SNX11Q9Y5W9 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
SNX11Q9Y5W9 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
SNX11Q9Y5W9 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
SNX11Q9Y5W9 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
SNX11Q9Y5W9 SOD2-201ENST00000337404 991 ntTSL 2 BASIC17.63■□□□□ 0.41
SNX11Q9Y5W9 INIP-202ENST00000374236 874 ntTSL 2 BASIC17.63■□□□□ 0.41
SNX11Q9Y5W9 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
SNX11Q9Y5W9 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC17.63■□□□□ 0.41
SNX11Q9Y5W9 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC17.63■□□□□ 0.41
SNX11Q9Y5W9 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC17.63■□□□□ 0.41
SNX11Q9Y5W9 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC17.63■□□□□ 0.41
SNX11Q9Y5W9 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC17.63■□□□□ 0.41
SNX11Q9Y5W9 MTDHP4-201ENST00000600287 670 ntBASIC17.63■□□□□ 0.41
SNX11Q9Y5W9 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC17.63■□□□□ 0.41
SNX11Q9Y5W9 Z83851.2-201ENST00000609564 659 ntBASIC17.63■□□□□ 0.41
SNX11Q9Y5W9 AL691403.2-201ENST00000618460 490 ntBASIC17.63■□□□□ 0.41
SNX11Q9Y5W9 AC055717.3-201ENST00000622967 595 ntBASIC17.63■□□□□ 0.41
SNX11Q9Y5W9 AC008735.5-201ENST00000623544 497 ntBASIC17.63■□□□□ 0.41
SNX11Q9Y5W9 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC17.63■□□□□ 0.41
SNX11Q9Y5W9 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
SNX11Q9Y5W9 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
SNX11Q9Y5W9 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
SNX11Q9Y5W9 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
SNX11Q9Y5W9 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
SNX11Q9Y5W9 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC17.63■□□□□ 0.41
SNX11Q9Y5W9 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
SNX11Q9Y5W9 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
SNX11Q9Y5W9 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
SNX11Q9Y5W9 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
SNX11Q9Y5W9 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
SNX11Q9Y5W9 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
SNX11Q9Y5W9 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
SNX11Q9Y5W9 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
SNX11Q9Y5W9 AC090164.3-201ENST00000610780 2143 ntBASIC17.62■□□□□ 0.41
SNX11Q9Y5W9 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
SNX11Q9Y5W9 AC020763.4-201ENST00000623414 4170 ntBASIC17.62■□□□□ 0.41
SNX11Q9Y5W9 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
SNX11Q9Y5W9 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
SNX11Q9Y5W9 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC17.62■□□□□ 0.41
SNX11Q9Y5W9 CTNS-203ENST00000399306 803 ntTSL 3 BASIC17.62■□□□□ 0.41
SNX11Q9Y5W9 CENPM-204ENST00000402420 688 ntTSL 5 BASIC17.62■□□□□ 0.41
SNX11Q9Y5W9 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC17.62■□□□□ 0.41
SNX11Q9Y5W9 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
SNX11Q9Y5W9 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC17.62■□□□□ 0.41
SNX11Q9Y5W9 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC17.62■□□□□ 0.41
SNX11Q9Y5W9 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
SNX11Q9Y5W9 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC17.62■□□□□ 0.41
SNX11Q9Y5W9 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
SNX11Q9Y5W9 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC17.62■□□□□ 0.41
SNX11Q9Y5W9 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 34.8 ms