Protein–RNA interactions for Protein: Q9Y5F0

PCDHB13, Protocadherin beta-13, humanhuman

Predictions only

Length 798 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB13Q9Y5F0 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
PCDHB13Q9Y5F0 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
PCDHB13Q9Y5F0 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
PCDHB13Q9Y5F0 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC19.74■□□□□ 0.75
PCDHB13Q9Y5F0 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
PCDHB13Q9Y5F0 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
PCDHB13Q9Y5F0 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC19.74■□□□□ 0.75
PCDHB13Q9Y5F0 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC19.74■□□□□ 0.75
PCDHB13Q9Y5F0 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
PCDHB13Q9Y5F0 OR13I1P-201ENST00000609811 1264 ntBASIC19.74■□□□□ 0.75
PCDHB13Q9Y5F0 AC124864.1-201ENST00000623408 392 ntBASIC19.74■□□□□ 0.75
PCDHB13Q9Y5F0 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
PCDHB13Q9Y5F0 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
PCDHB13Q9Y5F0 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC19.74■□□□□ 0.75
PCDHB13Q9Y5F0 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
PCDHB13Q9Y5F0 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
PCDHB13Q9Y5F0 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC19.74■□□□□ 0.75
PCDHB13Q9Y5F0 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
PCDHB13Q9Y5F0 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
PCDHB13Q9Y5F0 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
PCDHB13Q9Y5F0 AC100803.2-201ENST00000562459 1963 ntBASIC19.74■□□□□ 0.75
PCDHB13Q9Y5F0 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC19.74■□□□□ 0.75
PCDHB13Q9Y5F0 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
PCDHB13Q9Y5F0 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
PCDHB13Q9Y5F0 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
PCDHB13Q9Y5F0 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
PCDHB13Q9Y5F0 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
PCDHB13Q9Y5F0 AC016734.2-201ENST00000624325 1377 ntBASIC19.73■□□□□ 0.75
PCDHB13Q9Y5F0 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
PCDHB13Q9Y5F0 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
PCDHB13Q9Y5F0 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
PCDHB13Q9Y5F0 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
PCDHB13Q9Y5F0 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
PCDHB13Q9Y5F0 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
PCDHB13Q9Y5F0 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
PCDHB13Q9Y5F0 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
PCDHB13Q9Y5F0 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
PCDHB13Q9Y5F0 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
PCDHB13Q9Y5F0 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
PCDHB13Q9Y5F0 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC19.73■□□□□ 0.75
PCDHB13Q9Y5F0 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
PCDHB13Q9Y5F0 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
PCDHB13Q9Y5F0 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
PCDHB13Q9Y5F0 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
PCDHB13Q9Y5F0 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
PCDHB13Q9Y5F0 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
PCDHB13Q9Y5F0 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC19.73■□□□□ 0.75
PCDHB13Q9Y5F0 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC19.73■□□□□ 0.75
PCDHB13Q9Y5F0 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
PCDHB13Q9Y5F0 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC19.73■□□□□ 0.75
PCDHB13Q9Y5F0 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC19.73■□□□□ 0.75
PCDHB13Q9Y5F0 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
PCDHB13Q9Y5F0 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
PCDHB13Q9Y5F0 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC19.72■□□□□ 0.75
PCDHB13Q9Y5F0 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC19.72■□□□□ 0.75
PCDHB13Q9Y5F0 AC134043.2-201ENST00000624206 2238 ntBASIC19.72■□□□□ 0.75
PCDHB13Q9Y5F0 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
PCDHB13Q9Y5F0 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
PCDHB13Q9Y5F0 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
PCDHB13Q9Y5F0 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
PCDHB13Q9Y5F0 FZD10-202ENST00000539839 3282 ntBASIC19.72■□□□□ 0.75
PCDHB13Q9Y5F0 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
PCDHB13Q9Y5F0 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
PCDHB13Q9Y5F0 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC19.72■□□□□ 0.75
PCDHB13Q9Y5F0 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
PCDHB13Q9Y5F0 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
PCDHB13Q9Y5F0 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
PCDHB13Q9Y5F0 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC19.72■□□□□ 0.75
PCDHB13Q9Y5F0 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC19.72■□□□□ 0.75
PCDHB13Q9Y5F0 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
PCDHB13Q9Y5F0 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC19.72■□□□□ 0.75
PCDHB13Q9Y5F0 CHCHD2P8-201ENST00000429873 447 ntBASIC19.72■□□□□ 0.75
PCDHB13Q9Y5F0 C4orf45-201ENST00000434826 1215 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
PCDHB13Q9Y5F0 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC19.72■□□□□ 0.75
PCDHB13Q9Y5F0 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC19.72■□□□□ 0.75
PCDHB13Q9Y5F0 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC19.72■□□□□ 0.75
PCDHB13Q9Y5F0 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC19.72■□□□□ 0.75
PCDHB13Q9Y5F0 USP3-AS1-204ENST00000559861 620 ntTSL 5 BASIC19.72■□□□□ 0.75
PCDHB13Q9Y5F0 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
PCDHB13Q9Y5F0 AC103798.2-201ENST00000624292 632 ntBASIC19.72■□□□□ 0.75
PCDHB13Q9Y5F0 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC19.72■□□□□ 0.75
PCDHB13Q9Y5F0 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
PCDHB13Q9Y5F0 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC19.72■□□□□ 0.75
PCDHB13Q9Y5F0 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
PCDHB13Q9Y5F0 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
PCDHB13Q9Y5F0 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
PCDHB13Q9Y5F0 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
PCDHB13Q9Y5F0 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
PCDHB13Q9Y5F0 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
PCDHB13Q9Y5F0 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
PCDHB13Q9Y5F0 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
PCDHB13Q9Y5F0 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
PCDHB13Q9Y5F0 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
PCDHB13Q9Y5F0 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
PCDHB13Q9Y5F0 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
PCDHB13Q9Y5F0 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
PCDHB13Q9Y5F0 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
PCDHB13Q9Y5F0 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
PCDHB13Q9Y5F0 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
PCDHB13Q9Y5F0 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 35.2 ms