Protein–RNA interactions for Protein: Q9Y3T6

R3HCC1, R3H and coiled-coil domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
R3HCC1Q9Y3T6 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC20.47■□□□□ 0.87
R3HCC1Q9Y3T6 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
R3HCC1Q9Y3T6 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC20.47■□□□□ 0.87
R3HCC1Q9Y3T6 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
R3HCC1Q9Y3T6 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC20.47■□□□□ 0.87
R3HCC1Q9Y3T6 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC20.47■□□□□ 0.87
R3HCC1Q9Y3T6 CYP2D8P-201ENST00000433633 1490 ntBASIC20.47■□□□□ 0.87
R3HCC1Q9Y3T6 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC20.47■□□□□ 0.87
R3HCC1Q9Y3T6 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
R3HCC1Q9Y3T6 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC20.47■□□□□ 0.87
R3HCC1Q9Y3T6 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC20.47■□□□□ 0.87
R3HCC1Q9Y3T6 SERTM1-201ENST00000315190 3207 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
R3HCC1Q9Y3T6 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
R3HCC1Q9Y3T6 FEM1AP3-201ENST00000403722 1741 ntBASIC20.47■□□□□ 0.87
R3HCC1Q9Y3T6 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
R3HCC1Q9Y3T6 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC20.47■□□□□ 0.87
R3HCC1Q9Y3T6 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC20.47■□□□□ 0.87
R3HCC1Q9Y3T6 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC20.47■□□□□ 0.87
R3HCC1Q9Y3T6 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
R3HCC1Q9Y3T6 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC20.46■□□□□ 0.87
R3HCC1Q9Y3T6 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
R3HCC1Q9Y3T6 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC20.46■□□□□ 0.87
R3HCC1Q9Y3T6 ANKFY1-202ENST00000570535 6458 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
R3HCC1Q9Y3T6 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC20.46■□□□□ 0.87
R3HCC1Q9Y3T6 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
R3HCC1Q9Y3T6 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
R3HCC1Q9Y3T6 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC20.46■□□□□ 0.87
R3HCC1Q9Y3T6 TSPY14P-201ENST00000303979 915 ntBASIC20.46■□□□□ 0.87
R3HCC1Q9Y3T6 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
R3HCC1Q9Y3T6 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC20.46■□□□□ 0.87
R3HCC1Q9Y3T6 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
R3HCC1Q9Y3T6 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC20.46■□□□□ 0.87
R3HCC1Q9Y3T6 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC20.46■□□□□ 0.87
R3HCC1Q9Y3T6 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
R3HCC1Q9Y3T6 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC20.46■□□□□ 0.87
R3HCC1Q9Y3T6 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC20.46■□□□□ 0.87
R3HCC1Q9Y3T6 AC010947.1-201ENST00000623454 693 ntBASIC20.46■□□□□ 0.87
R3HCC1Q9Y3T6 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC20.46■□□□□ 0.87
R3HCC1Q9Y3T6 PDE1B-201ENST00000243052 3444 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
R3HCC1Q9Y3T6 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC20.46■□□□□ 0.87
R3HCC1Q9Y3T6 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC20.46■□□□□ 0.87
R3HCC1Q9Y3T6 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC20.46■□□□□ 0.87
R3HCC1Q9Y3T6 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
R3HCC1Q9Y3T6 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
R3HCC1Q9Y3T6 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC20.46■□□□□ 0.87
R3HCC1Q9Y3T6 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
R3HCC1Q9Y3T6 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
R3HCC1Q9Y3T6 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC20.46■□□□□ 0.87
R3HCC1Q9Y3T6 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC20.46■□□□□ 0.87
R3HCC1Q9Y3T6 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC20.46■□□□□ 0.87
R3HCC1Q9Y3T6 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
R3HCC1Q9Y3T6 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
R3HCC1Q9Y3T6 LINC00554-201ENST00000564841 3011 ntBASIC20.45■□□□□ 0.87
R3HCC1Q9Y3T6 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
R3HCC1Q9Y3T6 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
R3HCC1Q9Y3T6 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC20.45■□□□□ 0.86
R3HCC1Q9Y3T6 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC20.45■□□□□ 0.86
R3HCC1Q9Y3T6 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
R3HCC1Q9Y3T6 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
R3HCC1Q9Y3T6 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC20.45■□□□□ 0.86
R3HCC1Q9Y3T6 GMIP-204ENST00000587238 2987 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
R3HCC1Q9Y3T6 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC20.45■□□□□ 0.86
R3HCC1Q9Y3T6 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
R3HCC1Q9Y3T6 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
R3HCC1Q9Y3T6 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
R3HCC1Q9Y3T6 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC20.45■□□□□ 0.86
R3HCC1Q9Y3T6 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC20.45■□□□□ 0.86
R3HCC1Q9Y3T6 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC20.45■□□□□ 0.86
R3HCC1Q9Y3T6 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC20.45■□□□□ 0.86
R3HCC1Q9Y3T6 AKT1-214ENST00000555528 3066 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
R3HCC1Q9Y3T6 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
R3HCC1Q9Y3T6 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
R3HCC1Q9Y3T6 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC20.45■□□□□ 0.86
R3HCC1Q9Y3T6 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
R3HCC1Q9Y3T6 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
R3HCC1Q9Y3T6 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC20.45■□□□□ 0.86
R3HCC1Q9Y3T6 AL356309.3-201ENST00000624132 1934 ntBASIC20.45■□□□□ 0.86
R3HCC1Q9Y3T6 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC20.45■□□□□ 0.86
R3HCC1Q9Y3T6 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
R3HCC1Q9Y3T6 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC20.44■□□□□ 0.86
R3HCC1Q9Y3T6 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC20.44■□□□□ 0.86
R3HCC1Q9Y3T6 ADD1-201ENST00000264758 4045 ntAPPRIS P3 TSL 5 BASIC20.44■□□□□ 0.86
R3HCC1Q9Y3T6 PRMT6-201ENST00000370078 2616 ntAPPRIS P1 BASIC20.44■□□□□ 0.86
R3HCC1Q9Y3T6 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC20.44■□□□□ 0.86
R3HCC1Q9Y3T6 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC20.44■□□□□ 0.86
R3HCC1Q9Y3T6 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
R3HCC1Q9Y3T6 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC20.44■□□□□ 0.86
R3HCC1Q9Y3T6 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
R3HCC1Q9Y3T6 ECEL1P3-201ENST00000427961 737 ntBASIC20.44■□□□□ 0.86
R3HCC1Q9Y3T6 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
R3HCC1Q9Y3T6 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC20.44■□□□□ 0.86
R3HCC1Q9Y3T6 AC145285.6-201ENST00000604632 637 ntBASIC20.44■□□□□ 0.86
R3HCC1Q9Y3T6 CHST14-201ENST00000306243 3574 ntAPPRIS P1 BASIC20.44■□□□□ 0.86
R3HCC1Q9Y3T6 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
R3HCC1Q9Y3T6 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
R3HCC1Q9Y3T6 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
R3HCC1Q9Y3T6 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC20.44■□□□□ 0.86
R3HCC1Q9Y3T6 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
R3HCC1Q9Y3T6 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC20.44■□□□□ 0.86
R3HCC1Q9Y3T6 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 24.6 ms