Protein–RNA interactions for Protein: Q9UPM6

LHX6, LIM/homeobox protein Lhx6, humanhuman

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX6Q9UPM6 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
LHX6Q9UPM6 AL139400.1-201ENST00000366220 510 ntBASIC16.87■□□□□ 0.29
LHX6Q9UPM6 VCX3A-201ENST00000381089 995 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
LHX6Q9UPM6 PMS2P4-201ENST00000412466 1052 ntBASIC16.87■□□□□ 0.29
LHX6Q9UPM6 FRGCA-201ENST00000424933 422 ntTSL 3 BASIC16.87■□□□□ 0.29
LHX6Q9UPM6 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC16.87■□□□□ 0.29
LHX6Q9UPM6 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC16.87■□□□□ 0.29
LHX6Q9UPM6 DCTD-213ENST00000510370 794 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
LHX6Q9UPM6 AC055854.1-201ENST00000523627 570 ntTSL 4 BASIC16.87■□□□□ 0.29
LHX6Q9UPM6 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC16.87■□□□□ 0.29
LHX6Q9UPM6 AC087641.1-201ENST00000557561 1021 ntBASIC16.87■□□□□ 0.29
LHX6Q9UPM6 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
LHX6Q9UPM6 MIR3180-4-201ENST00000582223 153 ntBASIC16.87■□□□□ 0.29
LHX6Q9UPM6 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC16.87■□□□□ 0.29
LHX6Q9UPM6 AJ011932.1-201ENST00000621707 465 ntBASIC16.87■□□□□ 0.29
LHX6Q9UPM6 AC092865.6-201ENST00000642101 219 ntBASIC16.87■□□□□ 0.29
LHX6Q9UPM6 INTS4P1-201ENST00000438455 1935 ntBASIC16.87■□□□□ 0.29
LHX6Q9UPM6 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
LHX6Q9UPM6 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC16.87■□□□□ 0.29
LHX6Q9UPM6 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC16.87■□□□□ 0.29
LHX6Q9UPM6 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC16.87■□□□□ 0.29
LHX6Q9UPM6 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
LHX6Q9UPM6 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
LHX6Q9UPM6 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC16.87■□□□□ 0.29
LHX6Q9UPM6 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
LHX6Q9UPM6 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
LHX6Q9UPM6 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
LHX6Q9UPM6 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
LHX6Q9UPM6 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC16.87■□□□□ 0.29
LHX6Q9UPM6 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
LHX6Q9UPM6 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
LHX6Q9UPM6 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
LHX6Q9UPM6 RABEPK-206ENST00000628863 1537 ntTSL 5 BASIC16.86■□□□□ 0.29
LHX6Q9UPM6 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
LHX6Q9UPM6 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC16.86■□□□□ 0.29
LHX6Q9UPM6 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
LHX6Q9UPM6 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
LHX6Q9UPM6 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
LHX6Q9UPM6 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
LHX6Q9UPM6 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC16.86■□□□□ 0.29
LHX6Q9UPM6 AC034236.2-201ENST00000606662 1610 ntBASIC16.86■□□□□ 0.29
LHX6Q9UPM6 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
LHX6Q9UPM6 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC16.86■□□□□ 0.29
LHX6Q9UPM6 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
LHX6Q9UPM6 HEIH-201ENST00000623091 1652 ntBASIC16.86■□□□□ 0.29
LHX6Q9UPM6 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
LHX6Q9UPM6 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
LHX6Q9UPM6 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
LHX6Q9UPM6 LAGE3P1-201ENST00000425356 484 ntBASIC16.86■□□□□ 0.29
LHX6Q9UPM6 Z98749.2-201ENST00000428294 700 ntTSL 5 BASIC16.86■□□□□ 0.29
LHX6Q9UPM6 AL355478.1-201ENST00000431686 821 ntTSL 5 BASIC16.86■□□□□ 0.29
LHX6Q9UPM6 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC16.86■□□□□ 0.29
LHX6Q9UPM6 AC108751.1-201ENST00000490852 363 ntBASIC16.86■□□□□ 0.29
LHX6Q9UPM6 LINC02242-201ENST00000507298 641 ntTSL 5 BASIC16.86■□□□□ 0.29
LHX6Q9UPM6 AC064807.1-203ENST00000520357 575 ntTSL 5 BASIC16.86■□□□□ 0.29
LHX6Q9UPM6 RN7SL121P-201ENST00000584223 273 ntBASIC16.86■□□□□ 0.29
LHX6Q9UPM6 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC16.86■□□□□ 0.29
LHX6Q9UPM6 METTL23-205ENST00000588302 925 ntTSL 5 BASIC16.86■□□□□ 0.29
LHX6Q9UPM6 AP001542.1-201ENST00000591314 200 ntBASIC16.86■□□□□ 0.29
LHX6Q9UPM6 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC16.86■□□□□ 0.29
LHX6Q9UPM6 AC005593.1-201ENST00000624894 515 ntBASIC16.86■□□□□ 0.29
LHX6Q9UPM6 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC16.86■□□□□ 0.29
LHX6Q9UPM6 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
LHX6Q9UPM6 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
LHX6Q9UPM6 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
LHX6Q9UPM6 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
LHX6Q9UPM6 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
LHX6Q9UPM6 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
LHX6Q9UPM6 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC16.86■□□□□ 0.29
LHX6Q9UPM6 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
LHX6Q9UPM6 FZD10-202ENST00000539839 3282 ntBASIC16.86■□□□□ 0.29
LHX6Q9UPM6 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
LHX6Q9UPM6 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC16.86■□□□□ 0.29
LHX6Q9UPM6 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC16.86■□□□□ 0.29
LHX6Q9UPM6 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC16.86■□□□□ 0.29
LHX6Q9UPM6 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
LHX6Q9UPM6 AC006333.2-201ENST00000607957 2099 ntBASIC16.85■□□□□ 0.29
LHX6Q9UPM6 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC16.85■□□□□ 0.29
LHX6Q9UPM6 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
LHX6Q9UPM6 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
LHX6Q9UPM6 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC16.85■□□□□ 0.29
LHX6Q9UPM6 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
LHX6Q9UPM6 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
LHX6Q9UPM6 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
LHX6Q9UPM6 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC16.85■□□□□ 0.29
LHX6Q9UPM6 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
LHX6Q9UPM6 LCE1E-201ENST00000368770 1180 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
LHX6Q9UPM6 MRPL20P1-201ENST00000400819 433 ntBASIC16.85■□□□□ 0.29
LHX6Q9UPM6 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC16.85■□□□□ 0.29
LHX6Q9UPM6 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC16.85■□□□□ 0.29
LHX6Q9UPM6 RNA5SP421-201ENST00000516864 134 ntBASIC16.85■□□□□ 0.29
LHX6Q9UPM6 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC16.85■□□□□ 0.29
LHX6Q9UPM6 AC073569.1-201ENST00000548469 667 ntTSL 2 BASIC16.85■□□□□ 0.29
LHX6Q9UPM6 ZNF710-AS1-201ENST00000558334 1168 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
LHX6Q9UPM6 DUT-210ENST00000559935 569 ntTSL 3 BASIC16.85■□□□□ 0.29
LHX6Q9UPM6 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC16.85■□□□□ 0.29
LHX6Q9UPM6 MIR6752-201ENST00000618442 71 ntBASIC16.85■□□□□ 0.29
LHX6Q9UPM6 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC16.85■□□□□ 0.29
LHX6Q9UPM6 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
LHX6Q9UPM6 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 47.9 ms