Protein–RNA interactions for Protein: Q9UN71

PCDHGB4, Protocadherin gamma-B4, humanhuman

Predictions only

Length 923 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB4Q9UN71 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC17.34■□□□□ 0.37
PCDHGB4Q9UN71 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
PCDHGB4Q9UN71 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
PCDHGB4Q9UN71 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
PCDHGB4Q9UN71 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC17.34■□□□□ 0.37
PCDHGB4Q9UN71 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC17.34■□□□□ 0.37
PCDHGB4Q9UN71 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
PCDHGB4Q9UN71 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC17.34■□□□□ 0.37
PCDHGB4Q9UN71 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
PCDHGB4Q9UN71 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC17.34■□□□□ 0.37
PCDHGB4Q9UN71 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
PCDHGB4Q9UN71 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC17.34■□□□□ 0.37
PCDHGB4Q9UN71 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC17.34■□□□□ 0.37
PCDHGB4Q9UN71 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC17.34■□□□□ 0.37
PCDHGB4Q9UN71 AP003041.3-201ENST00000527151 707 ntBASIC17.34■□□□□ 0.37
PCDHGB4Q9UN71 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
PCDHGB4Q9UN71 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
PCDHGB4Q9UN71 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC17.34■□□□□ 0.37
PCDHGB4Q9UN71 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
PCDHGB4Q9UN71 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC17.34■□□□□ 0.37
PCDHGB4Q9UN71 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
PCDHGB4Q9UN71 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC17.34■□□□□ 0.37
PCDHGB4Q9UN71 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC17.34■□□□□ 0.37
PCDHGB4Q9UN71 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC17.34■□□□□ 0.37
PCDHGB4Q9UN71 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC17.34■□□□□ 0.37
PCDHGB4Q9UN71 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
PCDHGB4Q9UN71 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC17.34■□□□□ 0.37
PCDHGB4Q9UN71 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
PCDHGB4Q9UN71 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
PCDHGB4Q9UN71 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
PCDHGB4Q9UN71 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
PCDHGB4Q9UN71 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
PCDHGB4Q9UN71 AL096828.2-201ENST00000567259 1965 ntBASIC17.33■□□□□ 0.37
PCDHGB4Q9UN71 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
PCDHGB4Q9UN71 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC17.33■□□□□ 0.37
PCDHGB4Q9UN71 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
PCDHGB4Q9UN71 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
PCDHGB4Q9UN71 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
PCDHGB4Q9UN71 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
PCDHGB4Q9UN71 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC17.33■□□□□ 0.36
PCDHGB4Q9UN71 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
PCDHGB4Q9UN71 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
PCDHGB4Q9UN71 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC17.33■□□□□ 0.36
PCDHGB4Q9UN71 BX088651.1-201ENST00000540551 451 ntBASIC17.33■□□□□ 0.36
PCDHGB4Q9UN71 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC17.33■□□□□ 0.36
PCDHGB4Q9UN71 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC17.33■□□□□ 0.36
PCDHGB4Q9UN71 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
PCDHGB4Q9UN71 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
PCDHGB4Q9UN71 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
PCDHGB4Q9UN71 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC17.33■□□□□ 0.36
PCDHGB4Q9UN71 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
PCDHGB4Q9UN71 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC17.33■□□□□ 0.36
PCDHGB4Q9UN71 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
PCDHGB4Q9UN71 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
PCDHGB4Q9UN71 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC17.33■□□□□ 0.36
PCDHGB4Q9UN71 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC17.33■□□□□ 0.36
PCDHGB4Q9UN71 PLCB1-203ENST00000378641 7323 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
PCDHGB4Q9UN71 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC17.33■□□□□ 0.36
PCDHGB4Q9UN71 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
PCDHGB4Q9UN71 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC17.32■□□□□ 0.36
PCDHGB4Q9UN71 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC17.32■□□□□ 0.36
PCDHGB4Q9UN71 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
PCDHGB4Q9UN71 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PCDHGB4Q9UN71 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC17.32■□□□□ 0.36
PCDHGB4Q9UN71 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
PCDHGB4Q9UN71 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC17.32■□□□□ 0.36
PCDHGB4Q9UN71 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PCDHGB4Q9UN71 ADARB1-202ENST00000360697 6604 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
PCDHGB4Q9UN71 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
PCDHGB4Q9UN71 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
PCDHGB4Q9UN71 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC17.32■□□□□ 0.36
PCDHGB4Q9UN71 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC17.32■□□□□ 0.36
PCDHGB4Q9UN71 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PCDHGB4Q9UN71 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
PCDHGB4Q9UN71 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
PCDHGB4Q9UN71 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
PCDHGB4Q9UN71 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PCDHGB4Q9UN71 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
PCDHGB4Q9UN71 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
PCDHGB4Q9UN71 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC17.32■□□□□ 0.36
PCDHGB4Q9UN71 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC17.32■□□□□ 0.36
PCDHGB4Q9UN71 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
PCDHGB4Q9UN71 RBM17P1-201ENST00000453646 1190 ntBASIC17.32■□□□□ 0.36
PCDHGB4Q9UN71 DHDH-203ENST00000522614 776 ntTSL 5 BASIC17.32■□□□□ 0.36
PCDHGB4Q9UN71 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC17.32■□□□□ 0.36
PCDHGB4Q9UN71 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC17.32■□□□□ 0.36
PCDHGB4Q9UN71 MIR4674-201ENST00000582457 87 ntBASIC17.32■□□□□ 0.36
PCDHGB4Q9UN71 AL023803.3-201ENST00000615559 522 ntBASIC17.32■□□□□ 0.36
PCDHGB4Q9UN71 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
PCDHGB4Q9UN71 AC116562.4-202ENST00000641738 218 ntBASIC17.32■□□□□ 0.36
PCDHGB4Q9UN71 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC17.32■□□□□ 0.36
PCDHGB4Q9UN71 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PCDHGB4Q9UN71 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC17.32■□□□□ 0.36
PCDHGB4Q9UN71 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
PCDHGB4Q9UN71 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
PCDHGB4Q9UN71 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PCDHGB4Q9UN71 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
PCDHGB4Q9UN71 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PCDHGB4Q9UN71 PELI2-201ENST00000267460 5909 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PCDHGB4Q9UN71 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 18 ms