Protein–RNA interactions for Protein: Q9UHP3

USP25, Ubiquitin carboxyl-terminal hydrolase 25, humanhuman

Predictions only

Length 1,055 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP25Q9UHP3 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC20.47■□□□□ 0.87
USP25Q9UHP3 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
USP25Q9UHP3 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC20.47■□□□□ 0.87
USP25Q9UHP3 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
USP25Q9UHP3 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC20.47■□□□□ 0.87
USP25Q9UHP3 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
USP25Q9UHP3 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
USP25Q9UHP3 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
USP25Q9UHP3 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
USP25Q9UHP3 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
USP25Q9UHP3 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
USP25Q9UHP3 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
USP25Q9UHP3 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
USP25Q9UHP3 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC20.46■□□□□ 0.87
USP25Q9UHP3 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
USP25Q9UHP3 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC20.46■□□□□ 0.87
USP25Q9UHP3 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
USP25Q9UHP3 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
USP25Q9UHP3 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
USP25Q9UHP3 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC20.46■□□□□ 0.87
USP25Q9UHP3 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
USP25Q9UHP3 CRAT-202ENST00000393384 973 ntTSL 2 BASIC20.46■□□□□ 0.87
USP25Q9UHP3 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC20.46■□□□□ 0.87
USP25Q9UHP3 AC009947.2-201ENST00000444014 672 ntBASIC20.46■□□□□ 0.87
USP25Q9UHP3 TSPY15P-201ENST00000457163 923 ntBASIC20.46■□□□□ 0.87
USP25Q9UHP3 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC20.46■□□□□ 0.87
USP25Q9UHP3 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC20.46■□□□□ 0.87
USP25Q9UHP3 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC20.46■□□□□ 0.87
USP25Q9UHP3 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC20.46■□□□□ 0.87
USP25Q9UHP3 REEP1-209ENST00000541910 969 ntTSL 2 BASIC20.46■□□□□ 0.87
USP25Q9UHP3 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC20.46■□□□□ 0.87
USP25Q9UHP3 FAM87A-204ENST00000613235 858 ntBASIC20.46■□□□□ 0.87
USP25Q9UHP3 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC20.46■□□□□ 0.87
USP25Q9UHP3 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
USP25Q9UHP3 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
USP25Q9UHP3 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
USP25Q9UHP3 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC20.46■□□□□ 0.87
USP25Q9UHP3 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC20.46■□□□□ 0.87
USP25Q9UHP3 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
USP25Q9UHP3 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
USP25Q9UHP3 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC20.46■□□□□ 0.87
USP25Q9UHP3 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
USP25Q9UHP3 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC20.45■□□□□ 0.87
USP25Q9UHP3 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC20.45■□□□□ 0.86
USP25Q9UHP3 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
USP25Q9UHP3 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC20.45■□□□□ 0.86
USP25Q9UHP3 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC20.45■□□□□ 0.86
USP25Q9UHP3 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
USP25Q9UHP3 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC20.45■□□□□ 0.86
USP25Q9UHP3 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
USP25Q9UHP3 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC20.45■□□□□ 0.86
USP25Q9UHP3 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC20.45■□□□□ 0.86
USP25Q9UHP3 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
USP25Q9UHP3 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
USP25Q9UHP3 GAD2-202ENST00000376248 680 ntTSL 5 BASIC20.45■□□□□ 0.86
USP25Q9UHP3 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC20.45■□□□□ 0.86
USP25Q9UHP3 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
USP25Q9UHP3 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC20.45■□□□□ 0.86
USP25Q9UHP3 DUTP2-201ENST00000519164 463 ntBASIC20.45■□□□□ 0.86
USP25Q9UHP3 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC20.45■□□□□ 0.86
USP25Q9UHP3 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC20.45■□□□□ 0.86
USP25Q9UHP3 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC20.45■□□□□ 0.86
USP25Q9UHP3 NT5C-210ENST00000582160 860 ntTSL 2 BASIC20.45■□□□□ 0.86
USP25Q9UHP3 GPX4-207ENST00000589115 812 ntTSL 2 BASIC20.45■□□□□ 0.86
USP25Q9UHP3 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC20.45■□□□□ 0.86
USP25Q9UHP3 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
USP25Q9UHP3 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC20.45■□□□□ 0.86
USP25Q9UHP3 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC20.45■□□□□ 0.86
USP25Q9UHP3 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
USP25Q9UHP3 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC20.45■□□□□ 0.86
USP25Q9UHP3 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC20.45■□□□□ 0.86
USP25Q9UHP3 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC20.45■□□□□ 0.86
USP25Q9UHP3 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC20.45■□□□□ 0.86
USP25Q9UHP3 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
USP25Q9UHP3 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC20.45■□□□□ 0.86
USP25Q9UHP3 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
USP25Q9UHP3 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
USP25Q9UHP3 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC20.44■□□□□ 0.86
USP25Q9UHP3 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
USP25Q9UHP3 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
USP25Q9UHP3 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC20.44■□□□□ 0.86
USP25Q9UHP3 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC20.44■□□□□ 0.86
USP25Q9UHP3 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC20.44■□□□□ 0.86
USP25Q9UHP3 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
USP25Q9UHP3 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
USP25Q9UHP3 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
USP25Q9UHP3 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC20.44■□□□□ 0.86
USP25Q9UHP3 AC092865.7-201ENST00000641832 219 ntBASIC20.44■□□□□ 0.86
USP25Q9UHP3 AL121761.2-201ENST00000598007 1648 ntBASIC20.44■□□□□ 0.86
USP25Q9UHP3 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
USP25Q9UHP3 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
USP25Q9UHP3 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
USP25Q9UHP3 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC20.44■□□□□ 0.86
USP25Q9UHP3 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
USP25Q9UHP3 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC20.44■□□□□ 0.86
USP25Q9UHP3 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
USP25Q9UHP3 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC20.44■□□□□ 0.86
USP25Q9UHP3 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC20.44■□□□□ 0.86
USP25Q9UHP3 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC20.44■□□□□ 0.86
USP25Q9UHP3 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms