Protein–RNA interactions for Protein: Q9UGM1

CHRNA9, Neuronal acetylcholine receptor subunit alpha-9, humanhuman

Predictions only

Length 479 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA9Q9UGM1 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CHRNA9Q9UGM1 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CHRNA9Q9UGM1 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC16.3■□□□□ 0.2
CHRNA9Q9UGM1 TSPY12P-201ENST00000421279 868 ntBASIC16.3■□□□□ 0.2
CHRNA9Q9UGM1 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC16.3■□□□□ 0.2
CHRNA9Q9UGM1 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC16.3■□□□□ 0.2
CHRNA9Q9UGM1 AL390719.2-201ENST00000606993 987 ntBASIC16.3■□□□□ 0.2
CHRNA9Q9UGM1 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CHRNA9Q9UGM1 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
CHRNA9Q9UGM1 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CHRNA9Q9UGM1 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CHRNA9Q9UGM1 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
CHRNA9Q9UGM1 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC16.3■□□□□ 0.2
CHRNA9Q9UGM1 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CHRNA9Q9UGM1 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC16.3■□□□□ 0.2
CHRNA9Q9UGM1 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
CHRNA9Q9UGM1 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
CHRNA9Q9UGM1 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC16.3■□□□□ 0.2
CHRNA9Q9UGM1 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CHRNA9Q9UGM1 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
CHRNA9Q9UGM1 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CHRNA9Q9UGM1 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CHRNA9Q9UGM1 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
CHRNA9Q9UGM1 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CHRNA9Q9UGM1 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
CHRNA9Q9UGM1 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
CHRNA9Q9UGM1 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
CHRNA9Q9UGM1 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CHRNA9Q9UGM1 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC16.29■□□□□ 0.2
CHRNA9Q9UGM1 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CHRNA9Q9UGM1 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CHRNA9Q9UGM1 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC16.29■□□□□ 0.2
CHRNA9Q9UGM1 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CHRNA9Q9UGM1 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
CHRNA9Q9UGM1 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CHRNA9Q9UGM1 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CHRNA9Q9UGM1 CD320-202ENST00000537716 1119 ntTSL 2 BASIC16.29■□□□□ 0.2
CHRNA9Q9UGM1 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC16.29■□□□□ 0.2
CHRNA9Q9UGM1 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC16.29■□□□□ 0.2
CHRNA9Q9UGM1 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC16.29■□□□□ 0.2
CHRNA9Q9UGM1 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC16.29■□□□□ 0.2
CHRNA9Q9UGM1 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC16.29■□□□□ 0.2
CHRNA9Q9UGM1 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC16.29■□□□□ 0.2
CHRNA9Q9UGM1 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC16.29■□□□□ 0.2
CHRNA9Q9UGM1 RNF126P1-202ENST00000569893 925 ntBASIC16.29■□□□□ 0.2
CHRNA9Q9UGM1 RMI2-205ENST00000576027 818 ntTSL 2 BASIC16.29■□□□□ 0.2
CHRNA9Q9UGM1 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC16.29■□□□□ 0.2
CHRNA9Q9UGM1 AC009154.2-201ENST00000621177 724 ntBASIC16.29■□□□□ 0.2
CHRNA9Q9UGM1 ANKRD20A8P-203ENST00000641373 517 ntBASIC16.29■□□□□ 0.2
CHRNA9Q9UGM1 HR-201ENST00000312841 5351 ntTSL 5 BASIC16.29■□□□□ 0.2
CHRNA9Q9UGM1 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CHRNA9Q9UGM1 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CHRNA9Q9UGM1 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CHRNA9Q9UGM1 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC16.29■□□□□ 0.2
CHRNA9Q9UGM1 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
CHRNA9Q9UGM1 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
CHRNA9Q9UGM1 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC16.29■□□□□ 0.2
CHRNA9Q9UGM1 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
CHRNA9Q9UGM1 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CHRNA9Q9UGM1 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CHRNA9Q9UGM1 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CHRNA9Q9UGM1 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
CHRNA9Q9UGM1 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CHRNA9Q9UGM1 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CHRNA9Q9UGM1 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC16.28■□□□□ 0.2
CHRNA9Q9UGM1 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CHRNA9Q9UGM1 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
CHRNA9Q9UGM1 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CHRNA9Q9UGM1 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CHRNA9Q9UGM1 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CHRNA9Q9UGM1 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC16.28■□□□□ 0.2
CHRNA9Q9UGM1 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC16.28■□□□□ 0.2
CHRNA9Q9UGM1 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CHRNA9Q9UGM1 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC16.28■□□□□ 0.2
CHRNA9Q9UGM1 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC16.28■□□□□ 0.2
CHRNA9Q9UGM1 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC16.28■□□□□ 0.2
CHRNA9Q9UGM1 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CHRNA9Q9UGM1 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CHRNA9Q9UGM1 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
CHRNA9Q9UGM1 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CHRNA9Q9UGM1 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
CHRNA9Q9UGM1 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC16.28■□□□□ 0.2
CHRNA9Q9UGM1 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
CHRNA9Q9UGM1 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CHRNA9Q9UGM1 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC16.28■□□□□ 0.2
CHRNA9Q9UGM1 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
CHRNA9Q9UGM1 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC16.28■□□□□ 0.2
CHRNA9Q9UGM1 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
CHRNA9Q9UGM1 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CHRNA9Q9UGM1 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC16.27■□□□□ 0.2
CHRNA9Q9UGM1 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
CHRNA9Q9UGM1 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CHRNA9Q9UGM1 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC16.27■□□□□ 0.2
CHRNA9Q9UGM1 CEP83-AS1-201ENST00000623122 2482 ntBASIC16.27■□□□□ 0.2
CHRNA9Q9UGM1 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CHRNA9Q9UGM1 UBC-206ENST00000538617 1303 ntTSL 5 BASIC16.27■□□□□ 0.2
CHRNA9Q9UGM1 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CHRNA9Q9UGM1 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CHRNA9Q9UGM1 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CHRNA9Q9UGM1 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 66.3 ms