Protein–RNA interactions for Protein: Q9NXB0

MKS1, Meckel syndrome type 1 protein, humanhuman

Predictions only

Length 559 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1Q9NXB0 RHBDF1P1-201ENST00000427504 1941 ntBASIC17.61■□□□□ 0.41
MKS1Q9NXB0 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC17.61■□□□□ 0.41
MKS1Q9NXB0 AC060834.1-201ENST00000443027 2032 ntBASIC17.61■□□□□ 0.41
MKS1Q9NXB0 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC17.61■□□□□ 0.41
MKS1Q9NXB0 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
MKS1Q9NXB0 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC17.61■□□□□ 0.41
MKS1Q9NXB0 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
MKS1Q9NXB0 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC17.61■□□□□ 0.41
MKS1Q9NXB0 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
MKS1Q9NXB0 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
MKS1Q9NXB0 AC009947.2-201ENST00000444014 672 ntBASIC17.61■□□□□ 0.41
MKS1Q9NXB0 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC17.61■□□□□ 0.41
MKS1Q9NXB0 FAM201B-201ENST00000458407 597 ntBASIC17.61■□□□□ 0.41
MKS1Q9NXB0 AC098590.1-201ENST00000468126 897 ntBASIC17.61■□□□□ 0.41
MKS1Q9NXB0 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC17.61■□□□□ 0.41
MKS1Q9NXB0 AC142381.4-202ENST00000563973 229 ntBASIC17.61■□□□□ 0.41
MKS1Q9NXB0 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC17.61■□□□□ 0.41
MKS1Q9NXB0 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC17.61■□□□□ 0.41
MKS1Q9NXB0 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
MKS1Q9NXB0 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
MKS1Q9NXB0 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
MKS1Q9NXB0 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
MKS1Q9NXB0 LINC01311-201ENST00000565162 1445 ntBASIC17.61■□□□□ 0.41
MKS1Q9NXB0 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
MKS1Q9NXB0 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
MKS1Q9NXB0 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
MKS1Q9NXB0 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
MKS1Q9NXB0 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
MKS1Q9NXB0 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC17.61■□□□□ 0.41
MKS1Q9NXB0 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
MKS1Q9NXB0 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
MKS1Q9NXB0 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
MKS1Q9NXB0 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
MKS1Q9NXB0 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
MKS1Q9NXB0 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
MKS1Q9NXB0 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
MKS1Q9NXB0 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC17.6■□□□□ 0.41
MKS1Q9NXB0 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
MKS1Q9NXB0 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
MKS1Q9NXB0 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
MKS1Q9NXB0 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
MKS1Q9NXB0 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC17.6■□□□□ 0.41
MKS1Q9NXB0 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
MKS1Q9NXB0 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
MKS1Q9NXB0 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
MKS1Q9NXB0 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC17.6■□□□□ 0.41
MKS1Q9NXB0 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC17.6■□□□□ 0.41
MKS1Q9NXB0 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC17.6■□□□□ 0.41
MKS1Q9NXB0 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC17.6■□□□□ 0.41
MKS1Q9NXB0 AP000525.1-201ENST00000608286 694 ntBASIC17.6■□□□□ 0.41
MKS1Q9NXB0 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
MKS1Q9NXB0 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC17.6■□□□□ 0.41
MKS1Q9NXB0 BX276092.7-203ENST00000637198 1536 ntBASIC17.6■□□□□ 0.41
MKS1Q9NXB0 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
MKS1Q9NXB0 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC17.6■□□□□ 0.41
MKS1Q9NXB0 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC17.6■□□□□ 0.41
MKS1Q9NXB0 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
MKS1Q9NXB0 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
MKS1Q9NXB0 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
MKS1Q9NXB0 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
MKS1Q9NXB0 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
MKS1Q9NXB0 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
MKS1Q9NXB0 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
MKS1Q9NXB0 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC17.6■□□□□ 0.41
MKS1Q9NXB0 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC17.6■□□□□ 0.41
MKS1Q9NXB0 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
MKS1Q9NXB0 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
MKS1Q9NXB0 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC17.6■□□□□ 0.41
MKS1Q9NXB0 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
MKS1Q9NXB0 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
MKS1Q9NXB0 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
MKS1Q9NXB0 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC17.59■□□□□ 0.41
MKS1Q9NXB0 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC17.59■□□□□ 0.41
MKS1Q9NXB0 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
MKS1Q9NXB0 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
MKS1Q9NXB0 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
MKS1Q9NXB0 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
MKS1Q9NXB0 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
MKS1Q9NXB0 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
MKS1Q9NXB0 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC17.59■□□□□ 0.41
MKS1Q9NXB0 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
MKS1Q9NXB0 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
MKS1Q9NXB0 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC17.59■□□□□ 0.41
MKS1Q9NXB0 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC17.59■□□□□ 0.41
MKS1Q9NXB0 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
MKS1Q9NXB0 GAD2-202ENST00000376248 680 ntTSL 5 BASIC17.59■□□□□ 0.41
MKS1Q9NXB0 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC17.59■□□□□ 0.41
MKS1Q9NXB0 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC17.59■□□□□ 0.41
MKS1Q9NXB0 GCSHP5-201ENST00000443090 522 ntBASIC17.59■□□□□ 0.41
MKS1Q9NXB0 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC17.59■□□□□ 0.41
MKS1Q9NXB0 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC17.59■□□□□ 0.41
MKS1Q9NXB0 EGLN1P1-201ENST00000531623 762 ntBASIC17.59■□□□□ 0.41
MKS1Q9NXB0 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC17.59■□□□□ 0.41
MKS1Q9NXB0 TK1-205ENST00000590862 642 ntTSL 3 BASIC17.59■□□□□ 0.41
MKS1Q9NXB0 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC17.59■□□□□ 0.41
MKS1Q9NXB0 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC17.59■□□□□ 0.41
MKS1Q9NXB0 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
MKS1Q9NXB0 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC17.59■□□□□ 0.41
MKS1Q9NXB0 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC17.59■□□□□ 0.41
MKS1Q9NXB0 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 16.7 ms