Protein–RNA interactions for Protein: Q9NWY4

HPF1, Histone PARylation factor 1, humanhuman

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPF1Q9NWY4 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
HPF1Q9NWY4 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
HPF1Q9NWY4 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
HPF1Q9NWY4 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
HPF1Q9NWY4 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
HPF1Q9NWY4 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC16.56■□□□□ 0.24
HPF1Q9NWY4 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
HPF1Q9NWY4 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC16.56■□□□□ 0.24
HPF1Q9NWY4 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC16.56■□□□□ 0.24
HPF1Q9NWY4 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
HPF1Q9NWY4 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
HPF1Q9NWY4 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
HPF1Q9NWY4 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
HPF1Q9NWY4 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
HPF1Q9NWY4 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
HPF1Q9NWY4 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
HPF1Q9NWY4 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
HPF1Q9NWY4 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
HPF1Q9NWY4 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC16.56■□□□□ 0.24
HPF1Q9NWY4 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC16.56■□□□□ 0.24
HPF1Q9NWY4 AL845331.1-201ENST00000424978 1190 ntBASIC16.56■□□□□ 0.24
HPF1Q9NWY4 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC16.56■□□□□ 0.24
HPF1Q9NWY4 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
HPF1Q9NWY4 AC091607.1-201ENST00000490318 1060 ntBASIC16.56■□□□□ 0.24
HPF1Q9NWY4 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC16.56■□□□□ 0.24
HPF1Q9NWY4 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC16.56■□□□□ 0.24
HPF1Q9NWY4 AP005901.3-202ENST00000581653 237 ntBASIC16.56■□□□□ 0.24
HPF1Q9NWY4 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC16.56■□□□□ 0.24
HPF1Q9NWY4 IRF5-214ENST00000613821 595 ntTSL 5 BASIC16.56■□□□□ 0.24
HPF1Q9NWY4 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
HPF1Q9NWY4 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
HPF1Q9NWY4 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
HPF1Q9NWY4 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
HPF1Q9NWY4 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
HPF1Q9NWY4 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
HPF1Q9NWY4 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
HPF1Q9NWY4 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
HPF1Q9NWY4 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
HPF1Q9NWY4 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC16.55■□□□□ 0.24
HPF1Q9NWY4 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
HPF1Q9NWY4 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC16.55■□□□□ 0.24
HPF1Q9NWY4 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC16.55■□□□□ 0.24
HPF1Q9NWY4 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
HPF1Q9NWY4 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
HPF1Q9NWY4 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC16.55■□□□□ 0.24
HPF1Q9NWY4 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
HPF1Q9NWY4 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
HPF1Q9NWY4 TSPY19P-201ENST00000418461 509 ntBASIC16.55■□□□□ 0.24
HPF1Q9NWY4 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC16.55■□□□□ 0.24
HPF1Q9NWY4 TSPY18P-201ENST00000441642 509 ntBASIC16.55■□□□□ 0.24
HPF1Q9NWY4 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC16.55■□□□□ 0.24
HPF1Q9NWY4 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC16.55■□□□□ 0.24
HPF1Q9NWY4 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC16.55■□□□□ 0.24
HPF1Q9NWY4 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
HPF1Q9NWY4 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
HPF1Q9NWY4 AL732292.2-201ENST00000609649 430 ntBASIC16.55■□□□□ 0.24
HPF1Q9NWY4 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
HPF1Q9NWY4 AL353801.3-201ENST00000609898 542 ntBASIC16.55■□□□□ 0.24
HPF1Q9NWY4 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC16.55■□□□□ 0.24
HPF1Q9NWY4 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC16.55■□□□□ 0.24
HPF1Q9NWY4 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC16.55■□□□□ 0.24
HPF1Q9NWY4 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
HPF1Q9NWY4 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
HPF1Q9NWY4 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC16.55■□□□□ 0.24
HPF1Q9NWY4 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
HPF1Q9NWY4 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC16.55■□□□□ 0.24
HPF1Q9NWY4 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC16.55■□□□□ 0.24
HPF1Q9NWY4 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC16.55■□□□□ 0.24
HPF1Q9NWY4 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC16.55■□□□□ 0.24
HPF1Q9NWY4 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC16.55■□□□□ 0.24
HPF1Q9NWY4 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC16.54■□□□□ 0.24
HPF1Q9NWY4 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
HPF1Q9NWY4 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
HPF1Q9NWY4 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
HPF1Q9NWY4 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
HPF1Q9NWY4 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
HPF1Q9NWY4 PHGDH-209ENST00000641074 1780 ntBASIC16.54■□□□□ 0.24
HPF1Q9NWY4 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC16.54■□□□□ 0.24
HPF1Q9NWY4 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
HPF1Q9NWY4 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
HPF1Q9NWY4 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
HPF1Q9NWY4 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC16.54■□□□□ 0.24
HPF1Q9NWY4 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
HPF1Q9NWY4 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
HPF1Q9NWY4 NUS1P2-201ENST00000417358 873 ntBASIC16.54■□□□□ 0.24
HPF1Q9NWY4 KRT18P31-201ENST00000506277 1292 ntBASIC16.54■□□□□ 0.24
HPF1Q9NWY4 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC16.54■□□□□ 0.24
HPF1Q9NWY4 CDV3-207ENST00000508481 661 ntTSL 3 BASIC16.54■□□□□ 0.24
HPF1Q9NWY4 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC16.54■□□□□ 0.24
HPF1Q9NWY4 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
HPF1Q9NWY4 AL121894.2-201ENST00000602977 491 ntBASIC16.54■□□□□ 0.24
HPF1Q9NWY4 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC16.54■□□□□ 0.24
HPF1Q9NWY4 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
HPF1Q9NWY4 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
HPF1Q9NWY4 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
HPF1Q9NWY4 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC16.54■□□□□ 0.24
HPF1Q9NWY4 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC16.54■□□□□ 0.24
HPF1Q9NWY4 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
HPF1Q9NWY4 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
HPF1Q9NWY4 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC16.54■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 37.7 ms