Protein–RNA interactions for Protein: Q9NWF4

SLC52A1, Solute carrier family 52, riboflavin transporter, member 1, humanhuman

Predictions only

Length 448 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC52A1Q9NWF4 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC25.36■■□□□ 1.65
SLC52A1Q9NWF4 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC25.36■■□□□ 1.65
SLC52A1Q9NWF4 AC023141.13-201ENST00000604991 943 ntBASIC25.36■■□□□ 1.65
SLC52A1Q9NWF4 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC25.36■■□□□ 1.65
SLC52A1Q9NWF4 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC25.36■■□□□ 1.65
SLC52A1Q9NWF4 AC106028.4-201ENST00000614509 607 ntBASIC25.36■■□□□ 1.65
SLC52A1Q9NWF4 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC25.36■■□□□ 1.65
SLC52A1Q9NWF4 AC007064.4-201ENST00000637740 555 ntBASIC25.36■■□□□ 1.65
SLC52A1Q9NWF4 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC25.36■■□□□ 1.65
SLC52A1Q9NWF4 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
SLC52A1Q9NWF4 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC25.36■■□□□ 1.65
SLC52A1Q9NWF4 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC25.36■■□□□ 1.65
SLC52A1Q9NWF4 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC25.35■■□□□ 1.65
SLC52A1Q9NWF4 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC25.35■■□□□ 1.65
SLC52A1Q9NWF4 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
SLC52A1Q9NWF4 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC25.35■■□□□ 1.65
SLC52A1Q9NWF4 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC25.35■■□□□ 1.65
SLC52A1Q9NWF4 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC25.35■■□□□ 1.65
SLC52A1Q9NWF4 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
SLC52A1Q9NWF4 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC25.35■■□□□ 1.65
SLC52A1Q9NWF4 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC25.35■■□□□ 1.65
SLC52A1Q9NWF4 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC25.35■■□□□ 1.65
SLC52A1Q9NWF4 AC116407.2-201ENST00000613639 860 ntBASIC25.35■■□□□ 1.65
SLC52A1Q9NWF4 AC091812.2-201ENST00000619081 385 ntBASIC25.35■■□□□ 1.65
SLC52A1Q9NWF4 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC25.35■■□□□ 1.65
SLC52A1Q9NWF4 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
SLC52A1Q9NWF4 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC25.35■■□□□ 1.65
SLC52A1Q9NWF4 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
SLC52A1Q9NWF4 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
SLC52A1Q9NWF4 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
SLC52A1Q9NWF4 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
SLC52A1Q9NWF4 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
SLC52A1Q9NWF4 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC25.34■■□□□ 1.65
SLC52A1Q9NWF4 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC25.34■■□□□ 1.65
SLC52A1Q9NWF4 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC25.34■■□□□ 1.65
SLC52A1Q9NWF4 AC073130.3-201ENST00000624389 2278 ntBASIC25.34■■□□□ 1.65
SLC52A1Q9NWF4 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC25.34■■□□□ 1.65
SLC52A1Q9NWF4 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
SLC52A1Q9NWF4 HARS-201ENST00000307633 1780 ntTSL 2 BASIC25.34■■□□□ 1.65
SLC52A1Q9NWF4 EFTUD1P1-204ENST00000560401 1798 ntBASIC25.34■■□□□ 1.65
SLC52A1Q9NWF4 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC25.34■■□□□ 1.65
SLC52A1Q9NWF4 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
SLC52A1Q9NWF4 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
SLC52A1Q9NWF4 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC25.34■■□□□ 1.65
SLC52A1Q9NWF4 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC25.34■■□□□ 1.65
SLC52A1Q9NWF4 IGHV3-52-201ENST00000519770 353 ntBASIC25.34■■□□□ 1.65
SLC52A1Q9NWF4 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC25.34■■□□□ 1.65
SLC52A1Q9NWF4 SPCS2P1-201ENST00000561636 679 ntBASIC25.34■■□□□ 1.65
SLC52A1Q9NWF4 AC092902.6-201ENST00000641783 218 ntBASIC25.34■■□□□ 1.65
SLC52A1Q9NWF4 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
SLC52A1Q9NWF4 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
SLC52A1Q9NWF4 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC25.34■■□□□ 1.65
SLC52A1Q9NWF4 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC25.34■■□□□ 1.65
SLC52A1Q9NWF4 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
SLC52A1Q9NWF4 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
SLC52A1Q9NWF4 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC25.34■■□□□ 1.65
SLC52A1Q9NWF4 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC25.34■■□□□ 1.65
SLC52A1Q9NWF4 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
SLC52A1Q9NWF4 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC25.33■■□□□ 1.65
SLC52A1Q9NWF4 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
SLC52A1Q9NWF4 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
SLC52A1Q9NWF4 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC25.33■■□□□ 1.65
SLC52A1Q9NWF4 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC25.33■■□□□ 1.65
SLC52A1Q9NWF4 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC25.33■■□□□ 1.65
SLC52A1Q9NWF4 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC25.33■■□□□ 1.65
SLC52A1Q9NWF4 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC25.33■■□□□ 1.65
SLC52A1Q9NWF4 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
SLC52A1Q9NWF4 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC25.33■■□□□ 1.65
SLC52A1Q9NWF4 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC25.33■■□□□ 1.65
SLC52A1Q9NWF4 AC092809.2-202ENST00000436706 790 ntTSL 1 (best) BASIC25.33■■□□□ 1.65
SLC52A1Q9NWF4 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC25.33■■□□□ 1.65
SLC52A1Q9NWF4 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC25.33■■□□□ 1.65
SLC52A1Q9NWF4 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC25.33■■□□□ 1.65
SLC52A1Q9NWF4 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC25.33■■□□□ 1.65
SLC52A1Q9NWF4 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC25.33■■□□□ 1.65
SLC52A1Q9NWF4 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC25.33■■□□□ 1.65
SLC52A1Q9NWF4 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
SLC52A1Q9NWF4 AC093028.1-201ENST00000622998 982 ntBASIC25.33■■□□□ 1.65
SLC52A1Q9NWF4 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC25.33■■□□□ 1.65
SLC52A1Q9NWF4 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC25.33■■□□□ 1.65
SLC52A1Q9NWF4 AL096828.2-201ENST00000567259 1965 ntBASIC25.33■■□□□ 1.64
SLC52A1Q9NWF4 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC25.32■■□□□ 1.64
SLC52A1Q9NWF4 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC25.32■■□□□ 1.64
SLC52A1Q9NWF4 WDR61-201ENST00000267973 1387 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
SLC52A1Q9NWF4 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
SLC52A1Q9NWF4 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
SLC52A1Q9NWF4 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC25.32■■□□□ 1.64
SLC52A1Q9NWF4 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC25.32■■□□□ 1.64
SLC52A1Q9NWF4 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC25.32■■□□□ 1.64
SLC52A1Q9NWF4 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC25.32■■□□□ 1.64
SLC52A1Q9NWF4 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC25.32■■□□□ 1.64
SLC52A1Q9NWF4 AC002558.1-201ENST00000488906 803 ntBASIC25.32■■□□□ 1.64
SLC52A1Q9NWF4 AC020558.1-201ENST00000583662 425 ntTSL 3 BASIC25.32■■□□□ 1.64
SLC52A1Q9NWF4 AC011467.4-201ENST00000594891 528 ntBASIC25.32■■□□□ 1.64
SLC52A1Q9NWF4 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC25.32■■□□□ 1.64
SLC52A1Q9NWF4 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC25.32■■□□□ 1.64
SLC52A1Q9NWF4 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
SLC52A1Q9NWF4 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
SLC52A1Q9NWF4 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC25.32■■□□□ 1.64
SLC52A1Q9NWF4 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
Retrieved 100 of 98,524 protein–RNA pairs in 50.8 ms