Protein–RNA interactions for Protein: Q9NRF9

POLE3, DNA polymerase epsilon subunit 3, humanhuman

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLE3Q9NRF9 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC16.61■□□□□ 0.25
POLE3Q9NRF9 AC009154.2-201ENST00000621177 724 ntBASIC16.61■□□□□ 0.25
POLE3Q9NRF9 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
POLE3Q9NRF9 ANKRD20A8P-203ENST00000641373 517 ntBASIC16.61■□□□□ 0.25
POLE3Q9NRF9 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC16.61■□□□□ 0.25
POLE3Q9NRF9 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC16.61■□□□□ 0.25
POLE3Q9NRF9 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC16.61■□□□□ 0.25
POLE3Q9NRF9 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
POLE3Q9NRF9 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC16.61■□□□□ 0.25
POLE3Q9NRF9 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
POLE3Q9NRF9 NME9-203ENST00000383180 2133 ntTSL 2 BASIC16.61■□□□□ 0.25
POLE3Q9NRF9 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
POLE3Q9NRF9 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
POLE3Q9NRF9 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
POLE3Q9NRF9 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
POLE3Q9NRF9 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC16.61■□□□□ 0.25
POLE3Q9NRF9 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
POLE3Q9NRF9 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC16.61■□□□□ 0.25
POLE3Q9NRF9 AC067852.2-201ENST00000590513 2313 ntBASIC16.61■□□□□ 0.25
POLE3Q9NRF9 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
POLE3Q9NRF9 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC16.6■□□□□ 0.25
POLE3Q9NRF9 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
POLE3Q9NRF9 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC16.6■□□□□ 0.25
POLE3Q9NRF9 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
POLE3Q9NRF9 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC16.6■□□□□ 0.25
POLE3Q9NRF9 SIKE1-203ENST00000369528 5506 ntAPPRIS ALT1 TSL 1 (best) BASIC16.6■□□□□ 0.25
POLE3Q9NRF9 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
POLE3Q9NRF9 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
POLE3Q9NRF9 MIR662-201ENST00000384847 95 ntBASIC16.6■□□□□ 0.25
POLE3Q9NRF9 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC16.6■□□□□ 0.25
POLE3Q9NRF9 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
POLE3Q9NRF9 KRT18P57-201ENST00000443599 1254 ntBASIC16.6■□□□□ 0.25
POLE3Q9NRF9 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC16.6■□□□□ 0.25
POLE3Q9NRF9 PPOX-219ENST00000544598 813 ntTSL 2 BASIC16.6■□□□□ 0.25
POLE3Q9NRF9 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC16.6■□□□□ 0.25
POLE3Q9NRF9 FGF14-AS2-201ENST00000606448 1074 ntBASIC16.6■□□□□ 0.25
POLE3Q9NRF9 SPEG-225ENST00000617028 815 ntTSL 5 BASIC16.6■□□□□ 0.25
POLE3Q9NRF9 AC006011.2-201ENST00000621313 1158 ntBASIC16.6■□□□□ 0.25
POLE3Q9NRF9 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
POLE3Q9NRF9 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC16.6■□□□□ 0.25
POLE3Q9NRF9 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC16.6■□□□□ 0.25
POLE3Q9NRF9 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
POLE3Q9NRF9 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
POLE3Q9NRF9 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
POLE3Q9NRF9 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC16.6■□□□□ 0.25
POLE3Q9NRF9 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
POLE3Q9NRF9 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
POLE3Q9NRF9 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC16.6■□□□□ 0.25
POLE3Q9NRF9 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC16.6■□□□□ 0.25
POLE3Q9NRF9 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
POLE3Q9NRF9 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
POLE3Q9NRF9 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
POLE3Q9NRF9 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
POLE3Q9NRF9 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC16.59■□□□□ 0.25
POLE3Q9NRF9 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
POLE3Q9NRF9 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
POLE3Q9NRF9 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
POLE3Q9NRF9 HBZP1-201ENST00000354915 429 ntBASIC16.59■□□□□ 0.25
POLE3Q9NRF9 IGHGP-201ENST00000390555 1178 ntBASIC16.59■□□□□ 0.25
POLE3Q9NRF9 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC16.59■□□□□ 0.25
POLE3Q9NRF9 AC092647.4-201ENST00000457211 535 ntBASIC16.59■□□□□ 0.25
POLE3Q9NRF9 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC16.59■□□□□ 0.25
POLE3Q9NRF9 AP003733.1-201ENST00000491725 852 ntBASIC16.59■□□□□ 0.25
POLE3Q9NRF9 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC16.59■□□□□ 0.25
POLE3Q9NRF9 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC16.59■□□□□ 0.25
POLE3Q9NRF9 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
POLE3Q9NRF9 ZNF444P1-201ENST00000559497 298 ntBASIC16.59■□□□□ 0.25
POLE3Q9NRF9 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
POLE3Q9NRF9 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC16.59■□□□□ 0.25
POLE3Q9NRF9 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC16.59■□□□□ 0.25
POLE3Q9NRF9 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC16.59■□□□□ 0.25
POLE3Q9NRF9 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
POLE3Q9NRF9 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
POLE3Q9NRF9 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC16.59■□□□□ 0.25
POLE3Q9NRF9 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
POLE3Q9NRF9 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC16.59■□□□□ 0.25
POLE3Q9NRF9 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
POLE3Q9NRF9 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC16.59■□□□□ 0.25
POLE3Q9NRF9 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC16.59■□□□□ 0.25
POLE3Q9NRF9 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
POLE3Q9NRF9 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
POLE3Q9NRF9 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
POLE3Q9NRF9 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
POLE3Q9NRF9 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC16.58■□□□□ 0.25
POLE3Q9NRF9 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC16.58■□□□□ 0.25
POLE3Q9NRF9 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.25
POLE3Q9NRF9 STUM-201ENST00000366788 7705 ntAPPRIS P2 TSL 5 BASIC16.58■□□□□ 0.25
POLE3Q9NRF9 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.25
POLE3Q9NRF9 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
POLE3Q9NRF9 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
POLE3Q9NRF9 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
POLE3Q9NRF9 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
POLE3Q9NRF9 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
POLE3Q9NRF9 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
POLE3Q9NRF9 COPE-203ENST00000351079 907 ntTSL 2 BASIC16.58■□□□□ 0.24
POLE3Q9NRF9 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC16.58■□□□□ 0.24
POLE3Q9NRF9 TSPY12P-201ENST00000421279 868 ntBASIC16.58■□□□□ 0.24
POLE3Q9NRF9 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC16.58■□□□□ 0.24
POLE3Q9NRF9 DDX43P3-201ENST00000441064 443 ntBASIC16.58■□□□□ 0.24
POLE3Q9NRF9 AC092597.1-201ENST00000487352 616 ntBASIC16.58■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 66.8 ms