Protein–RNA interactions for Protein: Q9NRF8

CTPS2, CTP synthase 2, humanhuman

Predictions only

Length 586 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTPS2Q9NRF8 AC006116.8-202ENST00000587620 1550 ntBASIC16.64■□□□□ 0.25
CTPS2Q9NRF8 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC16.64■□□□□ 0.25
CTPS2Q9NRF8 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC16.64■□□□□ 0.25
CTPS2Q9NRF8 AC100803.2-201ENST00000562459 1963 ntBASIC16.64■□□□□ 0.25
CTPS2Q9NRF8 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CTPS2Q9NRF8 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC16.64■□□□□ 0.25
CTPS2Q9NRF8 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC16.64■□□□□ 0.25
CTPS2Q9NRF8 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
CTPS2Q9NRF8 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CTPS2Q9NRF8 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC16.64■□□□□ 0.25
CTPS2Q9NRF8 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC16.64■□□□□ 0.25
CTPS2Q9NRF8 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC16.64■□□□□ 0.25
CTPS2Q9NRF8 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
CTPS2Q9NRF8 AL441883.1-201ENST00000566170 1045 ntBASIC16.64■□□□□ 0.25
CTPS2Q9NRF8 AC139887.4-201ENST00000607877 719 ntBASIC16.64■□□□□ 0.25
CTPS2Q9NRF8 AL031432.5-201ENST00000641059 760 ntBASIC16.64■□□□□ 0.25
CTPS2Q9NRF8 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CTPS2Q9NRF8 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC16.64■□□□□ 0.25
CTPS2Q9NRF8 CEP83-AS1-201ENST00000623122 2482 ntBASIC16.64■□□□□ 0.25
CTPS2Q9NRF8 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CTPS2Q9NRF8 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC16.64■□□□□ 0.25
CTPS2Q9NRF8 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CTPS2Q9NRF8 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC16.64■□□□□ 0.25
CTPS2Q9NRF8 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CTPS2Q9NRF8 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CTPS2Q9NRF8 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
CTPS2Q9NRF8 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC16.64■□□□□ 0.25
CTPS2Q9NRF8 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC16.64■□□□□ 0.25
CTPS2Q9NRF8 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CTPS2Q9NRF8 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
CTPS2Q9NRF8 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CTPS2Q9NRF8 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
CTPS2Q9NRF8 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC16.63■□□□□ 0.25
CTPS2Q9NRF8 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
CTPS2Q9NRF8 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CTPS2Q9NRF8 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CTPS2Q9NRF8 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC16.63■□□□□ 0.25
CTPS2Q9NRF8 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CTPS2Q9NRF8 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC16.63■□□□□ 0.25
CTPS2Q9NRF8 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
CTPS2Q9NRF8 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
CTPS2Q9NRF8 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC16.63■□□□□ 0.25
CTPS2Q9NRF8 AC117947.1-201ENST00000427448 529 ntBASIC16.63■□□□□ 0.25
CTPS2Q9NRF8 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CTPS2Q9NRF8 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC16.63■□□□□ 0.25
CTPS2Q9NRF8 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC16.63■□□□□ 0.25
CTPS2Q9NRF8 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC16.63■□□□□ 0.25
CTPS2Q9NRF8 AC011558.1-201ENST00000623459 338 ntBASIC16.63■□□□□ 0.25
CTPS2Q9NRF8 AL157888.1-201ENST00000631930 593 ntBASIC16.63■□□□□ 0.25
CTPS2Q9NRF8 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC16.63■□□□□ 0.25
CTPS2Q9NRF8 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CTPS2Q9NRF8 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CTPS2Q9NRF8 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
CTPS2Q9NRF8 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
CTPS2Q9NRF8 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CTPS2Q9NRF8 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
CTPS2Q9NRF8 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
CTPS2Q9NRF8 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC16.63■□□□□ 0.25
CTPS2Q9NRF8 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC16.63■□□□□ 0.25
CTPS2Q9NRF8 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC16.63■□□□□ 0.25
CTPS2Q9NRF8 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CTPS2Q9NRF8 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
CTPS2Q9NRF8 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC16.63■□□□□ 0.25
CTPS2Q9NRF8 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CTPS2Q9NRF8 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
CTPS2Q9NRF8 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC16.62■□□□□ 0.25
CTPS2Q9NRF8 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CTPS2Q9NRF8 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CTPS2Q9NRF8 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CTPS2Q9NRF8 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CTPS2Q9NRF8 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CTPS2Q9NRF8 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CTPS2Q9NRF8 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CTPS2Q9NRF8 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CTPS2Q9NRF8 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
CTPS2Q9NRF8 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CTPS2Q9NRF8 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CTPS2Q9NRF8 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
CTPS2Q9NRF8 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC16.62■□□□□ 0.25
CTPS2Q9NRF8 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CTPS2Q9NRF8 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CTPS2Q9NRF8 YBX1P2-201ENST00000489612 999 ntBASIC16.62■□□□□ 0.25
CTPS2Q9NRF8 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC16.62■□□□□ 0.25
CTPS2Q9NRF8 CD81-212ENST00000526072 1172 ntTSL 5 BASIC16.62■□□□□ 0.25
CTPS2Q9NRF8 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC16.62■□□□□ 0.25
CTPS2Q9NRF8 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
CTPS2Q9NRF8 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
CTPS2Q9NRF8 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CTPS2Q9NRF8 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CTPS2Q9NRF8 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
CTPS2Q9NRF8 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
CTPS2Q9NRF8 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CTPS2Q9NRF8 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CTPS2Q9NRF8 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CTPS2Q9NRF8 AC132938.6-201ENST00000623828 1655 ntBASIC16.62■□□□□ 0.25
CTPS2Q9NRF8 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CTPS2Q9NRF8 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CTPS2Q9NRF8 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CTPS2Q9NRF8 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
CTPS2Q9NRF8 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 36.1 ms