Protein–RNA interactions for Protein: Q9NR12

PDLIM7, PDZ and LIM domain protein 7, humanhuman

Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7Q9NR12 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC19.89■□□□□ 0.77
PDLIM7Q9NR12 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC19.89■□□□□ 0.77
PDLIM7Q9NR12 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
PDLIM7Q9NR12 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
PDLIM7Q9NR12 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.77
PDLIM7Q9NR12 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC19.89■□□□□ 0.77
PDLIM7Q9NR12 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.77
PDLIM7Q9NR12 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC19.89■□□□□ 0.77
PDLIM7Q9NR12 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC19.89■□□□□ 0.77
PDLIM7Q9NR12 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
PDLIM7Q9NR12 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC19.89■□□□□ 0.77
PDLIM7Q9NR12 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC19.89■□□□□ 0.77
PDLIM7Q9NR12 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC19.89■□□□□ 0.77
PDLIM7Q9NR12 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
PDLIM7Q9NR12 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC19.89■□□□□ 0.77
PDLIM7Q9NR12 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC19.89■□□□□ 0.77
PDLIM7Q9NR12 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC19.89■□□□□ 0.77
PDLIM7Q9NR12 COPE-211ENST00000600932 1144 ntTSL 5 BASIC19.89■□□□□ 0.77
PDLIM7Q9NR12 AC064836.3-201ENST00000607928 673 ntBASIC19.89■□□□□ 0.77
PDLIM7Q9NR12 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
PDLIM7Q9NR12 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.77
PDLIM7Q9NR12 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
PDLIM7Q9NR12 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC19.89■□□□□ 0.77
PDLIM7Q9NR12 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC19.88■□□□□ 0.77
PDLIM7Q9NR12 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC19.88■□□□□ 0.77
PDLIM7Q9NR12 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
PDLIM7Q9NR12 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
PDLIM7Q9NR12 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC19.88■□□□□ 0.77
PDLIM7Q9NR12 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC19.88■□□□□ 0.77
PDLIM7Q9NR12 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
PDLIM7Q9NR12 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
PDLIM7Q9NR12 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
PDLIM7Q9NR12 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
PDLIM7Q9NR12 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
PDLIM7Q9NR12 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC19.88■□□□□ 0.77
PDLIM7Q9NR12 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
PDLIM7Q9NR12 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC19.88■□□□□ 0.77
PDLIM7Q9NR12 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC19.88■□□□□ 0.77
PDLIM7Q9NR12 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC19.88■□□□□ 0.77
PDLIM7Q9NR12 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC19.88■□□□□ 0.77
PDLIM7Q9NR12 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC19.88■□□□□ 0.77
PDLIM7Q9NR12 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
PDLIM7Q9NR12 MSRA-206ENST00000521209 814 ntTSL 3 BASIC19.88■□□□□ 0.77
PDLIM7Q9NR12 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC19.88■□□□□ 0.77
PDLIM7Q9NR12 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC19.88■□□□□ 0.77
PDLIM7Q9NR12 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC19.88■□□□□ 0.77
PDLIM7Q9NR12 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC19.88■□□□□ 0.77
PDLIM7Q9NR12 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC19.88■□□□□ 0.77
PDLIM7Q9NR12 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC19.88■□□□□ 0.77
PDLIM7Q9NR12 CYGB-205ENST00000590175 830 ntTSL 3 BASIC19.88■□□□□ 0.77
PDLIM7Q9NR12 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC19.88■□□□□ 0.77
PDLIM7Q9NR12 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC19.88■□□□□ 0.77
PDLIM7Q9NR12 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
PDLIM7Q9NR12 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
PDLIM7Q9NR12 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
PDLIM7Q9NR12 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
PDLIM7Q9NR12 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
PDLIM7Q9NR12 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
PDLIM7Q9NR12 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC19.88■□□□□ 0.77
PDLIM7Q9NR12 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
PDLIM7Q9NR12 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
PDLIM7Q9NR12 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
PDLIM7Q9NR12 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC19.88■□□□□ 0.77
PDLIM7Q9NR12 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
PDLIM7Q9NR12 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC19.88■□□□□ 0.77
PDLIM7Q9NR12 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
PDLIM7Q9NR12 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
PDLIM7Q9NR12 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
PDLIM7Q9NR12 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC19.87■□□□□ 0.77
PDLIM7Q9NR12 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
PDLIM7Q9NR12 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC19.87■□□□□ 0.77
PDLIM7Q9NR12 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC19.87■□□□□ 0.77
PDLIM7Q9NR12 DEPTOR-203ENST00000523492 1397 ntTSL 2 BASIC19.87■□□□□ 0.77
PDLIM7Q9NR12 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC19.87■□□□□ 0.77
PDLIM7Q9NR12 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
PDLIM7Q9NR12 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
PDLIM7Q9NR12 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC19.87■□□□□ 0.77
PDLIM7Q9NR12 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC19.87■□□□□ 0.77
PDLIM7Q9NR12 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
PDLIM7Q9NR12 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC19.87■□□□□ 0.77
PDLIM7Q9NR12 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC19.87■□□□□ 0.77
PDLIM7Q9NR12 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC19.87■□□□□ 0.77
PDLIM7Q9NR12 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC19.87■□□□□ 0.77
PDLIM7Q9NR12 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC19.87■□□□□ 0.77
PDLIM7Q9NR12 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC19.87■□□□□ 0.77
PDLIM7Q9NR12 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
PDLIM7Q9NR12 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
PDLIM7Q9NR12 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
PDLIM7Q9NR12 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
PDLIM7Q9NR12 REXO1L9P-201ENST00000604264 2108 ntBASIC19.87■□□□□ 0.77
PDLIM7Q9NR12 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
PDLIM7Q9NR12 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
PDLIM7Q9NR12 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC19.86■□□□□ 0.77
PDLIM7Q9NR12 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
PDLIM7Q9NR12 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
PDLIM7Q9NR12 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
PDLIM7Q9NR12 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
PDLIM7Q9NR12 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
PDLIM7Q9NR12 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC19.86■□□□□ 0.77
PDLIM7Q9NR12 KRT8P47-201ENST00000604727 1398 ntBASIC19.86■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 32.6 ms