Protein–RNA interactions for Protein: Q9NQG7

HPS4, Hermansky-Pudlak syndrome 4 protein, humanhuman

Predictions only

Length 708 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4Q9NQG7 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
HPS4Q9NQG7 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC18.45■□□□□ 0.54
HPS4Q9NQG7 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC18.45■□□□□ 0.54
HPS4Q9NQG7 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
HPS4Q9NQG7 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
HPS4Q9NQG7 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC18.45■□□□□ 0.54
HPS4Q9NQG7 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
HPS4Q9NQG7 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC18.45■□□□□ 0.54
HPS4Q9NQG7 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
HPS4Q9NQG7 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC18.45■□□□□ 0.54
HPS4Q9NQG7 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC18.45■□□□□ 0.54
HPS4Q9NQG7 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC18.45■□□□□ 0.54
HPS4Q9NQG7 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
HPS4Q9NQG7 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
HPS4Q9NQG7 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC18.44■□□□□ 0.54
HPS4Q9NQG7 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC18.44■□□□□ 0.54
HPS4Q9NQG7 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
HPS4Q9NQG7 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
HPS4Q9NQG7 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC18.44■□□□□ 0.54
HPS4Q9NQG7 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
HPS4Q9NQG7 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
HPS4Q9NQG7 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
HPS4Q9NQG7 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
HPS4Q9NQG7 CSF3-203ENST00000394148 622 ntTSL 3 BASIC18.44■□□□□ 0.54
HPS4Q9NQG7 KRT18P13-201ENST00000400056 1290 ntBASIC18.44■□□□□ 0.54
HPS4Q9NQG7 PIN1-206ENST00000587625 878 ntTSL 2 BASIC18.44■□□□□ 0.54
HPS4Q9NQG7 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC18.44■□□□□ 0.54
HPS4Q9NQG7 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC18.44■□□□□ 0.54
HPS4Q9NQG7 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
HPS4Q9NQG7 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
HPS4Q9NQG7 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC18.44■□□□□ 0.54
HPS4Q9NQG7 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
HPS4Q9NQG7 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
HPS4Q9NQG7 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC18.44■□□□□ 0.54
HPS4Q9NQG7 AC132938.6-201ENST00000623828 1655 ntBASIC18.44■□□□□ 0.54
HPS4Q9NQG7 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC18.44■□□□□ 0.54
HPS4Q9NQG7 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC18.44■□□□□ 0.54
HPS4Q9NQG7 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
HPS4Q9NQG7 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
HPS4Q9NQG7 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
HPS4Q9NQG7 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
HPS4Q9NQG7 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
HPS4Q9NQG7 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
HPS4Q9NQG7 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
HPS4Q9NQG7 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
HPS4Q9NQG7 AL356309.3-201ENST00000624132 1934 ntBASIC18.43■□□□□ 0.54
HPS4Q9NQG7 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
HPS4Q9NQG7 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
HPS4Q9NQG7 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC18.43■□□□□ 0.54
HPS4Q9NQG7 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
HPS4Q9NQG7 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
HPS4Q9NQG7 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC18.43■□□□□ 0.54
HPS4Q9NQG7 KIRREL3-AS3-201ENST00000404882 831 ntBASIC18.43■□□□□ 0.54
HPS4Q9NQG7 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
HPS4Q9NQG7 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC18.43■□□□□ 0.54
HPS4Q9NQG7 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC18.43■□□□□ 0.54
HPS4Q9NQG7 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
HPS4Q9NQG7 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
HPS4Q9NQG7 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC18.43■□□□□ 0.54
HPS4Q9NQG7 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
HPS4Q9NQG7 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
HPS4Q9NQG7 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC18.43■□□□□ 0.54
HPS4Q9NQG7 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
HPS4Q9NQG7 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC18.43■□□□□ 0.54
HPS4Q9NQG7 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
HPS4Q9NQG7 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
HPS4Q9NQG7 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
HPS4Q9NQG7 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC18.43■□□□□ 0.54
HPS4Q9NQG7 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
HPS4Q9NQG7 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
HPS4Q9NQG7 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
HPS4Q9NQG7 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC18.42■□□□□ 0.54
HPS4Q9NQG7 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC18.42■□□□□ 0.54
HPS4Q9NQG7 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
HPS4Q9NQG7 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC18.42■□□□□ 0.54
HPS4Q9NQG7 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC18.42■□□□□ 0.54
HPS4Q9NQG7 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC18.42■□□□□ 0.54
HPS4Q9NQG7 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
HPS4Q9NQG7 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
HPS4Q9NQG7 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
HPS4Q9NQG7 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
HPS4Q9NQG7 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
HPS4Q9NQG7 RPS2P28-201ENST00000314255 741 ntBASIC18.42■□□□□ 0.54
HPS4Q9NQG7 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
HPS4Q9NQG7 MIR940-201ENST00000401276 94 ntBASIC18.42■□□□□ 0.54
HPS4Q9NQG7 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC18.42■□□□□ 0.54
HPS4Q9NQG7 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC18.42■□□□□ 0.54
HPS4Q9NQG7 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC18.42■□□□□ 0.54
HPS4Q9NQG7 IGHV3-22-201ENST00000520721 359 ntBASIC18.42■□□□□ 0.54
HPS4Q9NQG7 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC18.42■□□□□ 0.54
HPS4Q9NQG7 AC012640.2-201ENST00000561606 901 ntBASIC18.42■□□□□ 0.54
HPS4Q9NQG7 PNMT-203ENST00000581428 677 ntTSL 2 BASIC18.42■□□□□ 0.54
HPS4Q9NQG7 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC18.42■□□□□ 0.54
HPS4Q9NQG7 AC025062.2-201ENST00000605477 670 ntBASIC18.42■□□□□ 0.54
HPS4Q9NQG7 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
HPS4Q9NQG7 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
HPS4Q9NQG7 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
HPS4Q9NQG7 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC18.42■□□□□ 0.54
HPS4Q9NQG7 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
HPS4Q9NQG7 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 25.3 ms