Protein–RNA interactions for Protein: Q9NQ36

SCUBE2, Signal peptide, CUB and EGF-like domain-containing protein 2, humanhuman

Predictions only

Length 999 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE2Q9NQ36 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
SCUBE2Q9NQ36 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
SCUBE2Q9NQ36 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
SCUBE2Q9NQ36 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC18.26■□□□□ 0.51
SCUBE2Q9NQ36 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
SCUBE2Q9NQ36 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
SCUBE2Q9NQ36 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
SCUBE2Q9NQ36 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
SCUBE2Q9NQ36 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
SCUBE2Q9NQ36 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
SCUBE2Q9NQ36 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
SCUBE2Q9NQ36 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC18.26■□□□□ 0.51
SCUBE2Q9NQ36 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC18.26■□□□□ 0.51
SCUBE2Q9NQ36 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
SCUBE2Q9NQ36 HIKESHI-201ENST00000278483 1113 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
SCUBE2Q9NQ36 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC18.26■□□□□ 0.51
SCUBE2Q9NQ36 TSSC2-201ENST00000450217 709 ntBASIC18.26■□□□□ 0.51
SCUBE2Q9NQ36 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC18.26■□□□□ 0.51
SCUBE2Q9NQ36 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
SCUBE2Q9NQ36 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC18.26■□□□□ 0.51
SCUBE2Q9NQ36 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC18.26■□□□□ 0.51
SCUBE2Q9NQ36 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC18.26■□□□□ 0.51
SCUBE2Q9NQ36 USP3-AS1-204ENST00000559861 620 ntTSL 5 BASIC18.26■□□□□ 0.51
SCUBE2Q9NQ36 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC18.26■□□□□ 0.51
SCUBE2Q9NQ36 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC18.26■□□□□ 0.51
SCUBE2Q9NQ36 AC090616.6-201ENST00000582640 721 ntBASIC18.26■□□□□ 0.51
SCUBE2Q9NQ36 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC18.26■□□□□ 0.51
SCUBE2Q9NQ36 AC008147.4-201ENST00000617570 1204 ntBASIC18.26■□□□□ 0.51
SCUBE2Q9NQ36 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
SCUBE2Q9NQ36 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
SCUBE2Q9NQ36 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC18.26■□□□□ 0.51
SCUBE2Q9NQ36 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC18.26■□□□□ 0.51
SCUBE2Q9NQ36 AC016734.2-201ENST00000624325 1377 ntBASIC18.26■□□□□ 0.51
SCUBE2Q9NQ36 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
SCUBE2Q9NQ36 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
SCUBE2Q9NQ36 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC18.26■□□□□ 0.51
SCUBE2Q9NQ36 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
SCUBE2Q9NQ36 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC18.26■□□□□ 0.51
SCUBE2Q9NQ36 AC138028.4-201ENST00000564984 1845 ntBASIC18.26■□□□□ 0.51
SCUBE2Q9NQ36 AC022898.2-201ENST00000616822 1312 ntBASIC18.25■□□□□ 0.51
SCUBE2Q9NQ36 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC18.25■□□□□ 0.51
SCUBE2Q9NQ36 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
SCUBE2Q9NQ36 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
SCUBE2Q9NQ36 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
SCUBE2Q9NQ36 STK4-201ENST00000372801 2038 ntTSL 2 BASIC18.25■□□□□ 0.51
SCUBE2Q9NQ36 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
SCUBE2Q9NQ36 AC005332.8-201ENST00000622750 2735 ntBASIC18.25■□□□□ 0.51
SCUBE2Q9NQ36 FLJ13224-201ENST00000313737 1514 ntBASIC18.25■□□□□ 0.51
SCUBE2Q9NQ36 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
SCUBE2Q9NQ36 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
SCUBE2Q9NQ36 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
SCUBE2Q9NQ36 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
SCUBE2Q9NQ36 ATXN3-201ENST00000340660 1205 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
SCUBE2Q9NQ36 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
SCUBE2Q9NQ36 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
SCUBE2Q9NQ36 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
SCUBE2Q9NQ36 OR5D16-201ENST00000378396 987 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
SCUBE2Q9NQ36 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
SCUBE2Q9NQ36 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC18.25■□□□□ 0.51
SCUBE2Q9NQ36 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC18.25■□□□□ 0.51
SCUBE2Q9NQ36 CHCHD2P8-201ENST00000429873 447 ntBASIC18.25■□□□□ 0.51
SCUBE2Q9NQ36 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC18.25■□□□□ 0.51
SCUBE2Q9NQ36 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC18.25■□□□□ 0.51
SCUBE2Q9NQ36 DUTP2-201ENST00000519164 463 ntBASIC18.25■□□□□ 0.51
SCUBE2Q9NQ36 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC18.25■□□□□ 0.51
SCUBE2Q9NQ36 AC124864.1-201ENST00000623408 392 ntBASIC18.25■□□□□ 0.51
SCUBE2Q9NQ36 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
SCUBE2Q9NQ36 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC18.25■□□□□ 0.51
SCUBE2Q9NQ36 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC18.25■□□□□ 0.51
SCUBE2Q9NQ36 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
SCUBE2Q9NQ36 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC18.25■□□□□ 0.51
SCUBE2Q9NQ36 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
SCUBE2Q9NQ36 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
SCUBE2Q9NQ36 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
SCUBE2Q9NQ36 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
SCUBE2Q9NQ36 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
SCUBE2Q9NQ36 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
SCUBE2Q9NQ36 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC18.25■□□□□ 0.51
SCUBE2Q9NQ36 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
SCUBE2Q9NQ36 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
SCUBE2Q9NQ36 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
SCUBE2Q9NQ36 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC18.24■□□□□ 0.51
SCUBE2Q9NQ36 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC18.24■□□□□ 0.51
SCUBE2Q9NQ36 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
SCUBE2Q9NQ36 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
SCUBE2Q9NQ36 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
SCUBE2Q9NQ36 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC18.24■□□□□ 0.51
SCUBE2Q9NQ36 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
SCUBE2Q9NQ36 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC18.24■□□□□ 0.51
SCUBE2Q9NQ36 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
SCUBE2Q9NQ36 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC18.24■□□□□ 0.51
SCUBE2Q9NQ36 SMIM26-201ENST00000411646 505 ntAPPRIS P5 TSL 1 (best) BASIC18.24■□□□□ 0.51
SCUBE2Q9NQ36 RPS27L-202ENST00000411926 528 ntTSL 3 BASIC18.24■□□□□ 0.51
SCUBE2Q9NQ36 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC18.24■□□□□ 0.51
SCUBE2Q9NQ36 SMIM26-202ENST00000435844 575 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
SCUBE2Q9NQ36 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC18.24■□□□□ 0.51
SCUBE2Q9NQ36 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC18.24■□□□□ 0.51
SCUBE2Q9NQ36 ITGB5-AS1-201ENST00000495917 460 ntTSL 3 BASIC18.24■□□□□ 0.51
SCUBE2Q9NQ36 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
SCUBE2Q9NQ36 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 28 ms