Protein–RNA interactions for Protein: Q9H9Y6

POLR1B, DNA-directed RNA polymerase I subunit RPA2, humanhuman

Predictions only

Length 1,135 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1BQ9H9Y6 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
POLR1BQ9H9Y6 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
POLR1BQ9H9Y6 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
POLR1BQ9H9Y6 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
POLR1BQ9H9Y6 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
POLR1BQ9H9Y6 ENSA-205ENST00000361532 792 ntTSL 2 BASIC17.68■□□□□ 0.42
POLR1BQ9H9Y6 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
POLR1BQ9H9Y6 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC17.68■□□□□ 0.42
POLR1BQ9H9Y6 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
POLR1BQ9H9Y6 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC17.68■□□□□ 0.42
POLR1BQ9H9Y6 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC17.68■□□□□ 0.42
POLR1BQ9H9Y6 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
POLR1BQ9H9Y6 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC17.68■□□□□ 0.42
POLR1BQ9H9Y6 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
POLR1BQ9H9Y6 GUSBP12-201ENST00000513727 720 ntBASIC17.68■□□□□ 0.42
POLR1BQ9H9Y6 AC064862.7-201ENST00000604520 867 ntBASIC17.68■□□□□ 0.42
POLR1BQ9H9Y6 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
POLR1BQ9H9Y6 AC117500.6-201ENST00000624871 588 ntBASIC17.68■□□□□ 0.42
POLR1BQ9H9Y6 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
POLR1BQ9H9Y6 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
POLR1BQ9H9Y6 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
POLR1BQ9H9Y6 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
POLR1BQ9H9Y6 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC17.68■□□□□ 0.42
POLR1BQ9H9Y6 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC17.68■□□□□ 0.42
POLR1BQ9H9Y6 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
POLR1BQ9H9Y6 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
POLR1BQ9H9Y6 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC17.67■□□□□ 0.42
POLR1BQ9H9Y6 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
POLR1BQ9H9Y6 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC17.67■□□□□ 0.42
POLR1BQ9H9Y6 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC17.67■□□□□ 0.42
POLR1BQ9H9Y6 AC008556.1-201ENST00000610908 2040 ntBASIC17.67■□□□□ 0.42
POLR1BQ9H9Y6 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
POLR1BQ9H9Y6 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC17.67■□□□□ 0.42
POLR1BQ9H9Y6 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
POLR1BQ9H9Y6 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
POLR1BQ9H9Y6 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
POLR1BQ9H9Y6 AC009053.2-201ENST00000563701 2365 ntBASIC17.67■□□□□ 0.42
POLR1BQ9H9Y6 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
POLR1BQ9H9Y6 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
POLR1BQ9H9Y6 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
POLR1BQ9H9Y6 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
POLR1BQ9H9Y6 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC17.67■□□□□ 0.42
POLR1BQ9H9Y6 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC17.67■□□□□ 0.42
POLR1BQ9H9Y6 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
POLR1BQ9H9Y6 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC17.67■□□□□ 0.42
POLR1BQ9H9Y6 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC17.67■□□□□ 0.42
POLR1BQ9H9Y6 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC17.67■□□□□ 0.42
POLR1BQ9H9Y6 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
POLR1BQ9H9Y6 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
POLR1BQ9H9Y6 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC17.67■□□□□ 0.42
POLR1BQ9H9Y6 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC17.67■□□□□ 0.42
POLR1BQ9H9Y6 AL590627.1-203ENST00000421194 1026 ntBASIC17.67■□□□□ 0.42
POLR1BQ9H9Y6 IGHV3-47-201ENST00000425060 335 ntBASIC17.67■□□□□ 0.42
POLR1BQ9H9Y6 SAPCD2P3-201ENST00000455031 850 ntBASIC17.67■□□□□ 0.42
POLR1BQ9H9Y6 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC17.67■□□□□ 0.42
POLR1BQ9H9Y6 VENTXP7-201ENST00000475503 772 ntBASIC17.67■□□□□ 0.42
POLR1BQ9H9Y6 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC17.67■□□□□ 0.42
POLR1BQ9H9Y6 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC17.67■□□□□ 0.42
POLR1BQ9H9Y6 FICD-205ENST00000552758 603 ntTSL 2 BASIC17.67■□□□□ 0.42
POLR1BQ9H9Y6 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC17.67■□□□□ 0.42
POLR1BQ9H9Y6 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
POLR1BQ9H9Y6 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
POLR1BQ9H9Y6 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
POLR1BQ9H9Y6 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
POLR1BQ9H9Y6 FST-202ENST00000396947 2538 ntTSL 5 BASIC17.67■□□□□ 0.42
POLR1BQ9H9Y6 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
POLR1BQ9H9Y6 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
POLR1BQ9H9Y6 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
POLR1BQ9H9Y6 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
POLR1BQ9H9Y6 HR-201ENST00000312841 5351 ntTSL 5 BASIC17.67■□□□□ 0.42
POLR1BQ9H9Y6 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
POLR1BQ9H9Y6 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
POLR1BQ9H9Y6 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
POLR1BQ9H9Y6 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC17.66■□□□□ 0.42
POLR1BQ9H9Y6 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
POLR1BQ9H9Y6 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
POLR1BQ9H9Y6 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
POLR1BQ9H9Y6 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
POLR1BQ9H9Y6 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
POLR1BQ9H9Y6 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
POLR1BQ9H9Y6 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
POLR1BQ9H9Y6 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC17.66■□□□□ 0.42
POLR1BQ9H9Y6 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
POLR1BQ9H9Y6 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
POLR1BQ9H9Y6 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC17.66■□□□□ 0.42
POLR1BQ9H9Y6 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
POLR1BQ9H9Y6 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC17.66■□□□□ 0.42
POLR1BQ9H9Y6 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC17.66■□□□□ 0.42
POLR1BQ9H9Y6 ELP6-205ENST00000439305 880 ntTSL 2 BASIC17.66■□□□□ 0.42
POLR1BQ9H9Y6 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC17.66■□□□□ 0.42
POLR1BQ9H9Y6 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC17.66■□□□□ 0.42
POLR1BQ9H9Y6 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC17.66■□□□□ 0.42
POLR1BQ9H9Y6 ABR-204ENST00000543210 1049 ntTSL 2 BASIC17.66■□□□□ 0.42
POLR1BQ9H9Y6 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC17.66■□□□□ 0.42
POLR1BQ9H9Y6 MIR3180-4-201ENST00000582223 153 ntBASIC17.66■□□□□ 0.42
POLR1BQ9H9Y6 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC17.66■□□□□ 0.42
POLR1BQ9H9Y6 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC17.66■□□□□ 0.42
POLR1BQ9H9Y6 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC17.66■□□□□ 0.42
POLR1BQ9H9Y6 AL592071.1-201ENST00000611956 408 ntBASIC17.66■□□□□ 0.42
POLR1BQ9H9Y6 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC17.66■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 31.5 ms