Protein–RNA interactions for Protein: Q9H5V9

CXorf56, UPF0428 protein CXorf56, humanhuman

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXorf56Q9H5V9 CICP14-201ENST00000629111 2732 ntBASIC17.44■□□□□ 0.38
CXorf56Q9H5V9 MICAL1-201ENST00000358577 3142 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
CXorf56Q9H5V9 FERMT3-201ENST00000279227 2489 ntAPPRIS P4 TSL 1 (best) BASIC17.44■□□□□ 0.38
CXorf56Q9H5V9 FERMT3-202ENST00000345728 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CXorf56Q9H5V9 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CXorf56Q9H5V9 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CXorf56Q9H5V9 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CXorf56Q9H5V9 RPS23-201ENST00000296674 3437 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CXorf56Q9H5V9 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CXorf56Q9H5V9 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
CXorf56Q9H5V9 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CXorf56Q9H5V9 PACSIN2-204ENST00000403744 2110 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CXorf56Q9H5V9 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC17.44■□□□□ 0.38
CXorf56Q9H5V9 ZNF131-214ENST00000509634 3340 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
CXorf56Q9H5V9 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
CXorf56Q9H5V9 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CXorf56Q9H5V9 SLC5A7-202ENST00000409059 2032 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CXorf56Q9H5V9 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CXorf56Q9H5V9 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
CXorf56Q9H5V9 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CXorf56Q9H5V9 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CXorf56Q9H5V9 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC17.43■□□□□ 0.38
CXorf56Q9H5V9 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC17.43■□□□□ 0.38
CXorf56Q9H5V9 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
CXorf56Q9H5V9 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
CXorf56Q9H5V9 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CXorf56Q9H5V9 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
CXorf56Q9H5V9 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC17.43■□□□□ 0.38
CXorf56Q9H5V9 GGT1-206ENST00000404223 952 ntTSL 2 BASIC17.43■□□□□ 0.38
CXorf56Q9H5V9 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CXorf56Q9H5V9 MAPKAPK3-203ENST00000446044 2988 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CXorf56Q9H5V9 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC17.43■□□□□ 0.38
CXorf56Q9H5V9 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CXorf56Q9H5V9 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
CXorf56Q9H5V9 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC17.43■□□□□ 0.38
CXorf56Q9H5V9 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC17.43■□□□□ 0.38
CXorf56Q9H5V9 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC17.43■□□□□ 0.38
CXorf56Q9H5V9 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC17.43■□□□□ 0.38
CXorf56Q9H5V9 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC17.43■□□□□ 0.38
CXorf56Q9H5V9 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CXorf56Q9H5V9 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CXorf56Q9H5V9 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC17.43■□□□□ 0.38
CXorf56Q9H5V9 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC17.43■□□□□ 0.38
CXorf56Q9H5V9 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
CXorf56Q9H5V9 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CXorf56Q9H5V9 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CXorf56Q9H5V9 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC17.43■□□□□ 0.38
CXorf56Q9H5V9 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CXorf56Q9H5V9 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CXorf56Q9H5V9 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CXorf56Q9H5V9 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC17.43■□□□□ 0.38
CXorf56Q9H5V9 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CXorf56Q9H5V9 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC17.43■□□□□ 0.38
CXorf56Q9H5V9 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CXorf56Q9H5V9 KIF5C-201ENST00000435030 6931 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CXorf56Q9H5V9 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CXorf56Q9H5V9 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC17.43■□□□□ 0.38
CXorf56Q9H5V9 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
CXorf56Q9H5V9 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CXorf56Q9H5V9 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC17.43■□□□□ 0.38
CXorf56Q9H5V9 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC17.43■□□□□ 0.38
CXorf56Q9H5V9 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CXorf56Q9H5V9 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC17.43■□□□□ 0.38
CXorf56Q9H5V9 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CXorf56Q9H5V9 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CXorf56Q9H5V9 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CXorf56Q9H5V9 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
CXorf56Q9H5V9 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
CXorf56Q9H5V9 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CXorf56Q9H5V9 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CXorf56Q9H5V9 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC17.42■□□□□ 0.38
CXorf56Q9H5V9 SLC44A2-203ENST00000586078 3784 ntTSL 5 BASIC17.42■□□□□ 0.38
CXorf56Q9H5V9 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CXorf56Q9H5V9 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CXorf56Q9H5V9 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CXorf56Q9H5V9 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CXorf56Q9H5V9 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CXorf56Q9H5V9 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC17.42■□□□□ 0.38
CXorf56Q9H5V9 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC17.42■□□□□ 0.38
CXorf56Q9H5V9 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC17.42■□□□□ 0.38
CXorf56Q9H5V9 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC17.42■□□□□ 0.38
CXorf56Q9H5V9 AC073912.3-201ENST00000624414 853 ntBASIC17.42■□□□□ 0.38
CXorf56Q9H5V9 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CXorf56Q9H5V9 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC17.42■□□□□ 0.38
CXorf56Q9H5V9 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CXorf56Q9H5V9 IRX1P1-201ENST00000438849 1838 ntBASIC17.42■□□□□ 0.38
CXorf56Q9H5V9 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
CXorf56Q9H5V9 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC17.42■□□□□ 0.38
CXorf56Q9H5V9 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CXorf56Q9H5V9 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CXorf56Q9H5V9 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CXorf56Q9H5V9 PPP3CB-201ENST00000342558 2418 ntTSL 5 BASIC17.41■□□□□ 0.38
CXorf56Q9H5V9 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CXorf56Q9H5V9 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
CXorf56Q9H5V9 P2RX5-TAX1BP3-201ENST00000550383 5905 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
CXorf56Q9H5V9 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CXorf56Q9H5V9 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CXorf56Q9H5V9 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CXorf56Q9H5V9 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
CXorf56Q9H5V9 TBC1D2-201ENST00000342112 3046 ntTSL 2 BASIC17.41■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 48.1 ms