Protein–RNA interactions for Protein: Q9H347

UBQLN3, Ubiquilin-3, humanhuman

Predictions only

Length 655 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN3Q9H347 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
UBQLN3Q9H347 HLA-DQB1-201ENST00000374943 1656 ntBASIC16.56■□□□□ 0.24
UBQLN3Q9H347 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
UBQLN3Q9H347 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC16.55■□□□□ 0.24
UBQLN3Q9H347 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
UBQLN3Q9H347 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC16.55■□□□□ 0.24
UBQLN3Q9H347 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
UBQLN3Q9H347 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC16.55■□□□□ 0.24
UBQLN3Q9H347 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
UBQLN3Q9H347 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
UBQLN3Q9H347 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
UBQLN3Q9H347 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
UBQLN3Q9H347 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
UBQLN3Q9H347 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
UBQLN3Q9H347 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC16.55■□□□□ 0.24
UBQLN3Q9H347 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
UBQLN3Q9H347 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC16.55■□□□□ 0.24
UBQLN3Q9H347 KRT18P56-201ENST00000507275 550 ntBASIC16.55■□□□□ 0.24
UBQLN3Q9H347 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC16.55■□□□□ 0.24
UBQLN3Q9H347 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC16.55■□□□□ 0.24
UBQLN3Q9H347 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC16.55■□□□□ 0.24
UBQLN3Q9H347 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
UBQLN3Q9H347 AC092119.3-201ENST00000612618 583 ntBASIC16.55■□□□□ 0.24
UBQLN3Q9H347 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
UBQLN3Q9H347 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC16.55■□□□□ 0.24
UBQLN3Q9H347 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC16.55■□□□□ 0.24
UBQLN3Q9H347 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
UBQLN3Q9H347 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
UBQLN3Q9H347 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
UBQLN3Q9H347 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
UBQLN3Q9H347 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC16.54■□□□□ 0.24
UBQLN3Q9H347 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC16.54■□□□□ 0.24
UBQLN3Q9H347 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
UBQLN3Q9H347 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC16.54■□□□□ 0.24
UBQLN3Q9H347 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
UBQLN3Q9H347 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
UBQLN3Q9H347 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
UBQLN3Q9H347 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
UBQLN3Q9H347 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
UBQLN3Q9H347 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC16.54■□□□□ 0.24
UBQLN3Q9H347 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
UBQLN3Q9H347 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC16.54■□□□□ 0.24
UBQLN3Q9H347 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC16.54■□□□□ 0.24
UBQLN3Q9H347 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
UBQLN3Q9H347 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
UBQLN3Q9H347 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC16.54■□□□□ 0.24
UBQLN3Q9H347 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
UBQLN3Q9H347 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
UBQLN3Q9H347 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC16.54■□□□□ 0.24
UBQLN3Q9H347 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC16.54■□□□□ 0.24
UBQLN3Q9H347 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
UBQLN3Q9H347 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC16.54■□□□□ 0.24
UBQLN3Q9H347 MNT-208ENST00000575394 606 ntTSL 4 BASIC16.54■□□□□ 0.24
UBQLN3Q9H347 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC16.54■□□□□ 0.24
UBQLN3Q9H347 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC16.54■□□□□ 0.24
UBQLN3Q9H347 AC090616.6-201ENST00000582640 721 ntBASIC16.54■□□□□ 0.24
UBQLN3Q9H347 AP002414.4-201ENST00000589764 1148 ntBASIC16.54■□□□□ 0.24
UBQLN3Q9H347 GXYLT1P4-201ENST00000613576 1192 ntBASIC16.54■□□□□ 0.24
UBQLN3Q9H347 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
UBQLN3Q9H347 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC16.54■□□□□ 0.24
UBQLN3Q9H347 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC16.54■□□□□ 0.24
UBQLN3Q9H347 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC16.54■□□□□ 0.24
UBQLN3Q9H347 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
UBQLN3Q9H347 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
UBQLN3Q9H347 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
UBQLN3Q9H347 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC16.54■□□□□ 0.24
UBQLN3Q9H347 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC16.54■□□□□ 0.24
UBQLN3Q9H347 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
UBQLN3Q9H347 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
UBQLN3Q9H347 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
UBQLN3Q9H347 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
UBQLN3Q9H347 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
UBQLN3Q9H347 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
UBQLN3Q9H347 AL353692.3-201ENST00000407031 1396 ntBASIC16.53■□□□□ 0.24
UBQLN3Q9H347 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
UBQLN3Q9H347 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
UBQLN3Q9H347 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
UBQLN3Q9H347 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
UBQLN3Q9H347 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
UBQLN3Q9H347 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
UBQLN3Q9H347 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
UBQLN3Q9H347 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
UBQLN3Q9H347 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
UBQLN3Q9H347 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
UBQLN3Q9H347 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
UBQLN3Q9H347 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC16.53■□□□□ 0.24
UBQLN3Q9H347 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
UBQLN3Q9H347 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
UBQLN3Q9H347 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
UBQLN3Q9H347 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC16.53■□□□□ 0.24
UBQLN3Q9H347 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC16.53■□□□□ 0.24
UBQLN3Q9H347 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC16.53■□□□□ 0.24
UBQLN3Q9H347 DRAXINP1-201ENST00000437611 948 ntBASIC16.53■□□□□ 0.24
UBQLN3Q9H347 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC16.53■□□□□ 0.24
UBQLN3Q9H347 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC16.53■□□□□ 0.24
UBQLN3Q9H347 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
UBQLN3Q9H347 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
UBQLN3Q9H347 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
UBQLN3Q9H347 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
UBQLN3Q9H347 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 39.2 ms