Protein–RNA interactions for Protein: Q9C0D0

PHACTR1, Phosphatase and actin regulator 1, humanhuman

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHACTR1Q9C0D0 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
PHACTR1Q9C0D0 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC18.11■□□□□ 0.49
PHACTR1Q9C0D0 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC18.11■□□□□ 0.49
PHACTR1Q9C0D0 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
PHACTR1Q9C0D0 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
PHACTR1Q9C0D0 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
PHACTR1Q9C0D0 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
PHACTR1Q9C0D0 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC18.11■□□□□ 0.49
PHACTR1Q9C0D0 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC18.11■□□□□ 0.49
PHACTR1Q9C0D0 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC18.11■□□□□ 0.49
PHACTR1Q9C0D0 HR-201ENST00000312841 5351 ntTSL 5 BASIC18.11■□□□□ 0.49
PHACTR1Q9C0D0 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
PHACTR1Q9C0D0 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC18.11■□□□□ 0.49
PHACTR1Q9C0D0 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
PHACTR1Q9C0D0 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
PHACTR1Q9C0D0 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
PHACTR1Q9C0D0 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
PHACTR1Q9C0D0 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC18.11■□□□□ 0.49
PHACTR1Q9C0D0 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
PHACTR1Q9C0D0 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC18.11■□□□□ 0.49
PHACTR1Q9C0D0 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC18.1■□□□□ 0.49
PHACTR1Q9C0D0 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC18.1■□□□□ 0.49
PHACTR1Q9C0D0 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC18.1■□□□□ 0.49
PHACTR1Q9C0D0 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC18.1■□□□□ 0.49
PHACTR1Q9C0D0 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC18.1■□□□□ 0.49
PHACTR1Q9C0D0 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC18.1■□□□□ 0.49
PHACTR1Q9C0D0 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC18.1■□□□□ 0.49
PHACTR1Q9C0D0 PTPN5-202ENST00000396166 2299 ntTSL 2 BASIC18.1■□□□□ 0.49
PHACTR1Q9C0D0 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
PHACTR1Q9C0D0 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC18.1■□□□□ 0.49
PHACTR1Q9C0D0 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC18.1■□□□□ 0.49
PHACTR1Q9C0D0 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC18.1■□□□□ 0.49
PHACTR1Q9C0D0 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC18.1■□□□□ 0.49
PHACTR1Q9C0D0 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC18.1■□□□□ 0.49
PHACTR1Q9C0D0 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC18.1■□□□□ 0.49
PHACTR1Q9C0D0 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC18.1■□□□□ 0.49
PHACTR1Q9C0D0 KRT8P47-201ENST00000604727 1398 ntBASIC18.1■□□□□ 0.49
PHACTR1Q9C0D0 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
PHACTR1Q9C0D0 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
PHACTR1Q9C0D0 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC18.1■□□□□ 0.49
PHACTR1Q9C0D0 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
PHACTR1Q9C0D0 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
PHACTR1Q9C0D0 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC18.1■□□□□ 0.49
PHACTR1Q9C0D0 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
PHACTR1Q9C0D0 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC18.1■□□□□ 0.49
PHACTR1Q9C0D0 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC18.1■□□□□ 0.49
PHACTR1Q9C0D0 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
PHACTR1Q9C0D0 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC18.1■□□□□ 0.49
PHACTR1Q9C0D0 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC18.1■□□□□ 0.49
PHACTR1Q9C0D0 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
PHACTR1Q9C0D0 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
PHACTR1Q9C0D0 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
PHACTR1Q9C0D0 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
PHACTR1Q9C0D0 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC18.1■□□□□ 0.49
PHACTR1Q9C0D0 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC18.1■□□□□ 0.49
PHACTR1Q9C0D0 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
PHACTR1Q9C0D0 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
PHACTR1Q9C0D0 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC18.09■□□□□ 0.49
PHACTR1Q9C0D0 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
PHACTR1Q9C0D0 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
PHACTR1Q9C0D0 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
PHACTR1Q9C0D0 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
PHACTR1Q9C0D0 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
PHACTR1Q9C0D0 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
PHACTR1Q9C0D0 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC18.09■□□□□ 0.49
PHACTR1Q9C0D0 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC18.09■□□□□ 0.49
PHACTR1Q9C0D0 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
PHACTR1Q9C0D0 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
PHACTR1Q9C0D0 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC18.09■□□□□ 0.49
PHACTR1Q9C0D0 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
PHACTR1Q9C0D0 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
PHACTR1Q9C0D0 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC18.09■□□□□ 0.49
PHACTR1Q9C0D0 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
PHACTR1Q9C0D0 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
PHACTR1Q9C0D0 MIR1238-201ENST00000408483 83 ntBASIC18.09■□□□□ 0.49
PHACTR1Q9C0D0 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC18.09■□□□□ 0.49
PHACTR1Q9C0D0 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC18.09■□□□□ 0.49
PHACTR1Q9C0D0 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
PHACTR1Q9C0D0 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC18.09■□□□□ 0.49
PHACTR1Q9C0D0 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC18.09■□□□□ 0.49
PHACTR1Q9C0D0 SNX21-213ENST00000614929 587 ntTSL 5 BASIC18.09■□□□□ 0.49
PHACTR1Q9C0D0 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC18.09■□□□□ 0.49
PHACTR1Q9C0D0 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC18.09■□□□□ 0.49
PHACTR1Q9C0D0 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
PHACTR1Q9C0D0 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC18.09■□□□□ 0.49
PHACTR1Q9C0D0 NKILA-202ENST00000614771 2598 ntBASIC18.09■□□□□ 0.49
PHACTR1Q9C0D0 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
PHACTR1Q9C0D0 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
PHACTR1Q9C0D0 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC18.09■□□□□ 0.49
PHACTR1Q9C0D0 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC18.09■□□□□ 0.49
PHACTR1Q9C0D0 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC18.08■□□□□ 0.49
PHACTR1Q9C0D0 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
PHACTR1Q9C0D0 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.49
PHACTR1Q9C0D0 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC18.08■□□□□ 0.49
PHACTR1Q9C0D0 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
PHACTR1Q9C0D0 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.49
PHACTR1Q9C0D0 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
PHACTR1Q9C0D0 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
PHACTR1Q9C0D0 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
PHACTR1Q9C0D0 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 35.8 ms