Protein–RNA interactions for Protein: Q9C040

TRIM2, Tripartite motif-containing protein 2, humanhuman

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM2Q9C040 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
TRIM2Q9C040 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
TRIM2Q9C040 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC16.46■□□□□ 0.23
TRIM2Q9C040 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
TRIM2Q9C040 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
TRIM2Q9C040 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
TRIM2Q9C040 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC16.46■□□□□ 0.23
TRIM2Q9C040 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC16.46■□□□□ 0.23
TRIM2Q9C040 AC022616.7-201ENST00000525383 220 ntBASIC16.46■□□□□ 0.23
TRIM2Q9C040 LINC01238-205ENST00000567549 1107 ntBASIC16.46■□□□□ 0.23
TRIM2Q9C040 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
TRIM2Q9C040 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
TRIM2Q9C040 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
TRIM2Q9C040 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC16.46■□□□□ 0.23
TRIM2Q9C040 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
TRIM2Q9C040 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
TRIM2Q9C040 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC16.46■□□□□ 0.22
TRIM2Q9C040 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.22
TRIM2Q9C040 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
TRIM2Q9C040 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC16.46■□□□□ 0.22
TRIM2Q9C040 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
TRIM2Q9C040 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC16.45■□□□□ 0.22
TRIM2Q9C040 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
TRIM2Q9C040 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
TRIM2Q9C040 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
TRIM2Q9C040 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
TRIM2Q9C040 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC16.45■□□□□ 0.22
TRIM2Q9C040 HECTD1-201ENST00000399332 9134 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
TRIM2Q9C040 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
TRIM2Q9C040 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
TRIM2Q9C040 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
TRIM2Q9C040 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
TRIM2Q9C040 RNF152P1-201ENST00000397754 604 ntBASIC16.45■□□□□ 0.22
TRIM2Q9C040 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
TRIM2Q9C040 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC16.45■□□□□ 0.22
TRIM2Q9C040 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC16.45■□□□□ 0.22
TRIM2Q9C040 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
TRIM2Q9C040 YBX1P2-201ENST00000489612 999 ntBASIC16.45■□□□□ 0.22
TRIM2Q9C040 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC16.45■□□□□ 0.22
TRIM2Q9C040 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
TRIM2Q9C040 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC16.45■□□□□ 0.22
TRIM2Q9C040 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC16.45■□□□□ 0.22
TRIM2Q9C040 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC16.45■□□□□ 0.22
TRIM2Q9C040 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC16.45■□□□□ 0.22
TRIM2Q9C040 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
TRIM2Q9C040 AL136038.4-201ENST00000603606 1261 ntBASIC16.45■□□□□ 0.22
TRIM2Q9C040 AC116407.2-201ENST00000613639 860 ntBASIC16.45■□□□□ 0.22
TRIM2Q9C040 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
TRIM2Q9C040 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC16.45■□□□□ 0.22
TRIM2Q9C040 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC16.45■□□□□ 0.22
TRIM2Q9C040 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC16.45■□□□□ 0.22
TRIM2Q9C040 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC16.45■□□□□ 0.22
TRIM2Q9C040 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
TRIM2Q9C040 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
TRIM2Q9C040 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
TRIM2Q9C040 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC16.45■□□□□ 0.22
TRIM2Q9C040 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC16.45■□□□□ 0.22
TRIM2Q9C040 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
TRIM2Q9C040 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC16.45■□□□□ 0.22
TRIM2Q9C040 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
TRIM2Q9C040 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
TRIM2Q9C040 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
TRIM2Q9C040 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
TRIM2Q9C040 SHISA6-203ENST00000432116 7518 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
TRIM2Q9C040 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC16.44■□□□□ 0.22
TRIM2Q9C040 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC16.44■□□□□ 0.22
TRIM2Q9C040 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC16.44■□□□□ 0.22
TRIM2Q9C040 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC16.44■□□□□ 0.22
TRIM2Q9C040 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
TRIM2Q9C040 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
TRIM2Q9C040 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
TRIM2Q9C040 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
TRIM2Q9C040 UBR3-201ENST00000272793 8005 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
TRIM2Q9C040 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC16.44■□□□□ 0.22
TRIM2Q9C040 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC16.44■□□□□ 0.22
TRIM2Q9C040 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
TRIM2Q9C040 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
TRIM2Q9C040 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
TRIM2Q9C040 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
TRIM2Q9C040 GUK1-204ENST00000366721 689 ntTSL 3 BASIC16.44■□□□□ 0.22
TRIM2Q9C040 HES2-202ENST00000377836 507 ntTSL 2 BASIC16.44■□□□□ 0.22
TRIM2Q9C040 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC16.44■□□□□ 0.22
TRIM2Q9C040 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC16.44■□□□□ 0.22
TRIM2Q9C040 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC16.44■□□□□ 0.22
TRIM2Q9C040 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC16.44■□□□□ 0.22
TRIM2Q9C040 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC16.44■□□□□ 0.22
TRIM2Q9C040 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
TRIM2Q9C040 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC16.44■□□□□ 0.22
TRIM2Q9C040 AL391807.1-203ENST00000604392 2365 ntBASIC16.44■□□□□ 0.22
TRIM2Q9C040 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
TRIM2Q9C040 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
TRIM2Q9C040 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC16.44■□□□□ 0.22
TRIM2Q9C040 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
TRIM2Q9C040 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC16.44■□□□□ 0.22
TRIM2Q9C040 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
TRIM2Q9C040 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
TRIM2Q9C040 TBL3-205ENST00000568546 6803 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
TRIM2Q9C040 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
TRIM2Q9C040 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC16.44■□□□□ 0.22
TRIM2Q9C040 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC16.44■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 26.4 ms