Protein–RNA interactions for Protein: Q9BVG3

TRIM62, E3 ubiquitin-protein ligase TRIM62, humanhuman

Predictions only

Length 475 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM62Q9BVG3 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC18.59■□□□□ 0.57
TRIM62Q9BVG3 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
TRIM62Q9BVG3 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
TRIM62Q9BVG3 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC18.59■□□□□ 0.57
TRIM62Q9BVG3 CCNC-219ENST00000627680 896 ntTSL 5 BASIC18.59■□□□□ 0.57
TRIM62Q9BVG3 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC18.59■□□□□ 0.57
TRIM62Q9BVG3 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC18.59■□□□□ 0.57
TRIM62Q9BVG3 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC18.59■□□□□ 0.57
TRIM62Q9BVG3 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
TRIM62Q9BVG3 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC18.59■□□□□ 0.57
TRIM62Q9BVG3 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
TRIM62Q9BVG3 TP73-AS1-210ENST00000637775 1455 ntBASIC18.58■□□□□ 0.57
TRIM62Q9BVG3 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC18.58■□□□□ 0.57
TRIM62Q9BVG3 NOC2LP1-202ENST00000452600 2235 ntBASIC18.58■□□□□ 0.57
TRIM62Q9BVG3 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
TRIM62Q9BVG3 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.57
TRIM62Q9BVG3 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
TRIM62Q9BVG3 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
TRIM62Q9BVG3 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
TRIM62Q9BVG3 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
TRIM62Q9BVG3 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
TRIM62Q9BVG3 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
TRIM62Q9BVG3 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
TRIM62Q9BVG3 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.57
TRIM62Q9BVG3 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.56
TRIM62Q9BVG3 COX5BP2-201ENST00000392354 334 ntBASIC18.58■□□□□ 0.56
TRIM62Q9BVG3 CTNS-203ENST00000399306 803 ntTSL 3 BASIC18.58■□□□□ 0.56
TRIM62Q9BVG3 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC18.58■□□□□ 0.56
TRIM62Q9BVG3 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.56
TRIM62Q9BVG3 AC007967.3-201ENST00000434308 558 ntBASIC18.58■□□□□ 0.56
TRIM62Q9BVG3 KRT16P4-201ENST00000453883 522 ntBASIC18.58■□□□□ 0.56
TRIM62Q9BVG3 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC18.58■□□□□ 0.56
TRIM62Q9BVG3 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC18.58■□□□□ 0.56
TRIM62Q9BVG3 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC18.58■□□□□ 0.56
TRIM62Q9BVG3 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC18.58■□□□□ 0.56
TRIM62Q9BVG3 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC18.58■□□□□ 0.56
TRIM62Q9BVG3 BNIP3P18-201ENST00000593976 575 ntBASIC18.58■□□□□ 0.56
TRIM62Q9BVG3 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC18.58■□□□□ 0.56
TRIM62Q9BVG3 LINC01711-201ENST00000598340 967 ntBASIC18.58■□□□□ 0.56
TRIM62Q9BVG3 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC18.58■□□□□ 0.56
TRIM62Q9BVG3 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC18.58■□□□□ 0.56
TRIM62Q9BVG3 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC18.58■□□□□ 0.56
TRIM62Q9BVG3 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.56
TRIM62Q9BVG3 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.56
TRIM62Q9BVG3 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
TRIM62Q9BVG3 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC18.58■□□□□ 0.56
TRIM62Q9BVG3 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
TRIM62Q9BVG3 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC18.58■□□□□ 0.56
TRIM62Q9BVG3 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC18.58■□□□□ 0.56
TRIM62Q9BVG3 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC18.58■□□□□ 0.56
TRIM62Q9BVG3 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC18.58■□□□□ 0.56
TRIM62Q9BVG3 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
TRIM62Q9BVG3 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
TRIM62Q9BVG3 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.56
TRIM62Q9BVG3 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.56
TRIM62Q9BVG3 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
TRIM62Q9BVG3 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
TRIM62Q9BVG3 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC18.57■□□□□ 0.56
TRIM62Q9BVG3 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
TRIM62Q9BVG3 NEFHP1-201ENST00000412845 2629 ntBASIC18.57■□□□□ 0.56
TRIM62Q9BVG3 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
TRIM62Q9BVG3 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
TRIM62Q9BVG3 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
TRIM62Q9BVG3 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
TRIM62Q9BVG3 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
TRIM62Q9BVG3 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
TRIM62Q9BVG3 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
TRIM62Q9BVG3 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
TRIM62Q9BVG3 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC18.57■□□□□ 0.56
TRIM62Q9BVG3 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
TRIM62Q9BVG3 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
TRIM62Q9BVG3 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
TRIM62Q9BVG3 AC103564.2-201ENST00000432853 1299 ntBASIC18.57■□□□□ 0.56
TRIM62Q9BVG3 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
TRIM62Q9BVG3 FICD-205ENST00000552758 603 ntTSL 2 BASIC18.57■□□□□ 0.56
TRIM62Q9BVG3 COX5A-202ENST00000562233 441 ntTSL 3 BASIC18.57■□□□□ 0.56
TRIM62Q9BVG3 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC18.57■□□□□ 0.56
TRIM62Q9BVG3 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC18.57■□□□□ 0.56
TRIM62Q9BVG3 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
TRIM62Q9BVG3 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
TRIM62Q9BVG3 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
TRIM62Q9BVG3 AC009949.1-201ENST00000623048 1830 ntBASIC18.57■□□□□ 0.56
TRIM62Q9BVG3 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
TRIM62Q9BVG3 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
TRIM62Q9BVG3 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
TRIM62Q9BVG3 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
TRIM62Q9BVG3 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
TRIM62Q9BVG3 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
TRIM62Q9BVG3 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC18.57■□□□□ 0.56
TRIM62Q9BVG3 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
TRIM62Q9BVG3 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
TRIM62Q9BVG3 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
TRIM62Q9BVG3 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
TRIM62Q9BVG3 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
TRIM62Q9BVG3 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
TRIM62Q9BVG3 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC18.57■□□□□ 0.56
TRIM62Q9BVG3 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
TRIM62Q9BVG3 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
TRIM62Q9BVG3 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
TRIM62Q9BVG3 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC18.56■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 27.4 ms