Protein–RNA interactions for Protein: Q96SN8

CDK5RAP2, CDK5 regulatory subunit-associated protein 2, humanhuman

Predictions only

Length 1,893 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP2Q96SN8 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CDK5RAP2Q96SN8 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
CDK5RAP2Q96SN8 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
CDK5RAP2Q96SN8 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC20.88■□□□□ 0.93
CDK5RAP2Q96SN8 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC20.88■□□□□ 0.93
CDK5RAP2Q96SN8 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC20.88■□□□□ 0.93
CDK5RAP2Q96SN8 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC20.88■□□□□ 0.93
CDK5RAP2Q96SN8 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC20.88■□□□□ 0.93
CDK5RAP2Q96SN8 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC20.88■□□□□ 0.93
CDK5RAP2Q96SN8 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
CDK5RAP2Q96SN8 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CDK5RAP2Q96SN8 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CDK5RAP2Q96SN8 AC003669.1-201ENST00000334569 611 ntBASIC20.88■□□□□ 0.93
CDK5RAP2Q96SN8 AC009947.1-201ENST00000444350 727 ntBASIC20.88■□□□□ 0.93
CDK5RAP2Q96SN8 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC20.88■□□□□ 0.93
CDK5RAP2Q96SN8 S100A2-206ENST00000497140 697 ntTSL 2 BASIC20.88■□□□□ 0.93
CDK5RAP2Q96SN8 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC20.88■□□□□ 0.93
CDK5RAP2Q96SN8 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC20.87■□□□□ 0.93
CDK5RAP2Q96SN8 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CDK5RAP2Q96SN8 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC20.87■□□□□ 0.93
CDK5RAP2Q96SN8 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC20.87■□□□□ 0.93
CDK5RAP2Q96SN8 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
CDK5RAP2Q96SN8 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CDK5RAP2Q96SN8 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
CDK5RAP2Q96SN8 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC20.87■□□□□ 0.93
CDK5RAP2Q96SN8 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CDK5RAP2Q96SN8 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
CDK5RAP2Q96SN8 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CDK5RAP2Q96SN8 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC20.87■□□□□ 0.93
CDK5RAP2Q96SN8 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
CDK5RAP2Q96SN8 AL020989.1-201ENST00000422979 469 ntBASIC20.87■□□□□ 0.93
CDK5RAP2Q96SN8 AL591424.1-201ENST00000442569 1213 ntBASIC20.87■□□□□ 0.93
CDK5RAP2Q96SN8 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC20.87■□□□□ 0.93
CDK5RAP2Q96SN8 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC20.87■□□□□ 0.93
CDK5RAP2Q96SN8 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC20.87■□□□□ 0.93
CDK5RAP2Q96SN8 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC20.87■□□□□ 0.93
CDK5RAP2Q96SN8 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
CDK5RAP2Q96SN8 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC20.87■□□□□ 0.93
CDK5RAP2Q96SN8 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
CDK5RAP2Q96SN8 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC20.87■□□□□ 0.93
CDK5RAP2Q96SN8 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CDK5RAP2Q96SN8 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
CDK5RAP2Q96SN8 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CDK5RAP2Q96SN8 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CDK5RAP2Q96SN8 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC20.86■□□□□ 0.93
CDK5RAP2Q96SN8 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC20.86■□□□□ 0.93
CDK5RAP2Q96SN8 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC20.86■□□□□ 0.93
CDK5RAP2Q96SN8 COX5A-202ENST00000562233 441 ntTSL 3 BASIC20.86■□□□□ 0.93
CDK5RAP2Q96SN8 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC20.86■□□□□ 0.93
CDK5RAP2Q96SN8 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC20.86■□□□□ 0.93
CDK5RAP2Q96SN8 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC20.86■□□□□ 0.93
CDK5RAP2Q96SN8 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
CDK5RAP2Q96SN8 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC20.86■□□□□ 0.93
CDK5RAP2Q96SN8 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC20.86■□□□□ 0.93
CDK5RAP2Q96SN8 GID4-202ENST00000376345 1391 ntTSL 3 BASIC20.86■□□□□ 0.93
CDK5RAP2Q96SN8 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
CDK5RAP2Q96SN8 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC20.86■□□□□ 0.93
CDK5RAP2Q96SN8 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CDK5RAP2Q96SN8 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC20.86■□□□□ 0.93
CDK5RAP2Q96SN8 COX5BP2-201ENST00000392354 334 ntBASIC20.86■□□□□ 0.93
CDK5RAP2Q96SN8 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC20.86■□□□□ 0.93
CDK5RAP2Q96SN8 ALG1L5P-201ENST00000482043 771 ntBASIC20.86■□□□□ 0.93
CDK5RAP2Q96SN8 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC20.86■□□□□ 0.93
CDK5RAP2Q96SN8 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC20.86■□□□□ 0.93
CDK5RAP2Q96SN8 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC20.86■□□□□ 0.93
CDK5RAP2Q96SN8 AL805961.1-202ENST00000641562 540 ntBASIC20.86■□□□□ 0.93
CDK5RAP2Q96SN8 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CDK5RAP2Q96SN8 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC20.86■□□□□ 0.93
CDK5RAP2Q96SN8 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC20.86■□□□□ 0.93
CDK5RAP2Q96SN8 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
CDK5RAP2Q96SN8 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CDK5RAP2Q96SN8 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
CDK5RAP2Q96SN8 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC20.85■□□□□ 0.93
CDK5RAP2Q96SN8 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC20.85■□□□□ 0.93
CDK5RAP2Q96SN8 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
CDK5RAP2Q96SN8 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
CDK5RAP2Q96SN8 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
CDK5RAP2Q96SN8 AC006116.8-202ENST00000587620 1550 ntBASIC20.85■□□□□ 0.93
CDK5RAP2Q96SN8 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
CDK5RAP2Q96SN8 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC20.85■□□□□ 0.93
CDK5RAP2Q96SN8 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
CDK5RAP2Q96SN8 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC20.85■□□□□ 0.93
CDK5RAP2Q96SN8 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC20.85■□□□□ 0.93
CDK5RAP2Q96SN8 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC20.85■□□□□ 0.93
CDK5RAP2Q96SN8 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
CDK5RAP2Q96SN8 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC20.85■□□□□ 0.93
CDK5RAP2Q96SN8 NKTR-203ENST00000442970 646 ntTSL 2 BASIC20.85■□□□□ 0.93
CDK5RAP2Q96SN8 AC092865.5-201ENST00000545435 363 ntBASIC20.85■□□□□ 0.93
CDK5RAP2Q96SN8 TCAP-202ENST00000578283 583 ntTSL 5 BASIC20.85■□□□□ 0.93
CDK5RAP2Q96SN8 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
CDK5RAP2Q96SN8 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CDK5RAP2Q96SN8 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
CDK5RAP2Q96SN8 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC20.84■□□□□ 0.93
CDK5RAP2Q96SN8 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CDK5RAP2Q96SN8 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
CDK5RAP2Q96SN8 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC20.84■□□□□ 0.93
CDK5RAP2Q96SN8 YBX2P1-201ENST00000394192 760 ntBASIC20.84■□□□□ 0.93
CDK5RAP2Q96SN8 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC20.84■□□□□ 0.93
CDK5RAP2Q96SN8 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC20.84■□□□□ 0.93
CDK5RAP2Q96SN8 AC116407.2-201ENST00000613639 860 ntBASIC20.84■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 79.9 ms