Protein–RNA interactions for Protein: Q96MX3

ZNF48, Zinc finger protein 48, humanhuman

Predicted RBP Predictions only

Length 618 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF48Q96MX3 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
ZNF48Q96MX3 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
ZNF48Q96MX3 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC14.51□□□□□ -0.09
ZNF48Q96MX3 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC14.51□□□□□ -0.09
ZNF48Q96MX3 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
ZNF48Q96MX3 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
ZNF48Q96MX3 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
ZNF48Q96MX3 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC14.51□□□□□ -0.09
ZNF48Q96MX3 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC14.51□□□□□ -0.09
ZNF48Q96MX3 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
ZNF48Q96MX3 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC14.51□□□□□ -0.09
ZNF48Q96MX3 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
ZNF48Q96MX3 RNPS1P1-201ENST00000507437 918 ntBASIC14.51□□□□□ -0.09
ZNF48Q96MX3 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC14.51□□□□□ -0.09
ZNF48Q96MX3 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC14.51□□□□□ -0.09
ZNF48Q96MX3 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
ZNF48Q96MX3 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC14.51□□□□□ -0.09
ZNF48Q96MX3 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC14.51□□□□□ -0.09
ZNF48Q96MX3 COX5A-204ENST00000567270 579 ntTSL 3 BASIC14.51□□□□□ -0.09
ZNF48Q96MX3 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC14.51□□□□□ -0.09
ZNF48Q96MX3 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC14.51□□□□□ -0.09
ZNF48Q96MX3 GZMM-202ENST00000592501 941 ntTSL 3 BASIC14.51□□□□□ -0.09
ZNF48Q96MX3 MTDHP3-201ENST00000594186 672 ntBASIC14.51□□□□□ -0.09
ZNF48Q96MX3 MIR7706-201ENST00000613747 67 ntBASIC14.51□□□□□ -0.09
ZNF48Q96MX3 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC14.51□□□□□ -0.09
ZNF48Q96MX3 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
ZNF48Q96MX3 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
ZNF48Q96MX3 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC14.51□□□□□ -0.09
ZNF48Q96MX3 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC14.51□□□□□ -0.09
ZNF48Q96MX3 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC14.51□□□□□ -0.09
ZNF48Q96MX3 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
ZNF48Q96MX3 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
ZNF48Q96MX3 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
ZNF48Q96MX3 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC14.51□□□□□ -0.09
ZNF48Q96MX3 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
ZNF48Q96MX3 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
ZNF48Q96MX3 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
ZNF48Q96MX3 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
ZNF48Q96MX3 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC14.51□□□□□ -0.09
ZNF48Q96MX3 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
ZNF48Q96MX3 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
ZNF48Q96MX3 AC125634.1-201ENST00000438758 1403 ntBASIC14.5□□□□□ -0.09
ZNF48Q96MX3 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
ZNF48Q96MX3 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
ZNF48Q96MX3 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC14.5□□□□□ -0.09
ZNF48Q96MX3 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC14.5□□□□□ -0.09
ZNF48Q96MX3 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
ZNF48Q96MX3 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC14.5□□□□□ -0.09
ZNF48Q96MX3 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC14.5□□□□□ -0.09
ZNF48Q96MX3 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
ZNF48Q96MX3 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
ZNF48Q96MX3 SNCG-201ENST00000348795 684 ntTSL 2 BASIC14.5□□□□□ -0.09
ZNF48Q96MX3 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC14.5□□□□□ -0.09
ZNF48Q96MX3 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC14.5□□□□□ -0.09
ZNF48Q96MX3 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
ZNF48Q96MX3 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC14.5□□□□□ -0.09
ZNF48Q96MX3 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC14.5□□□□□ -0.09
ZNF48Q96MX3 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
ZNF48Q96MX3 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
ZNF48Q96MX3 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
ZNF48Q96MX3 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
ZNF48Q96MX3 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC14.5□□□□□ -0.09
ZNF48Q96MX3 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
ZNF48Q96MX3 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
ZNF48Q96MX3 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
ZNF48Q96MX3 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC14.5□□□□□ -0.09
ZNF48Q96MX3 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
ZNF48Q96MX3 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
ZNF48Q96MX3 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
ZNF48Q96MX3 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC14.5□□□□□ -0.09
ZNF48Q96MX3 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
ZNF48Q96MX3 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
ZNF48Q96MX3 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
ZNF48Q96MX3 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC14.49□□□□□ -0.09
ZNF48Q96MX3 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC14.49□□□□□ -0.09
ZNF48Q96MX3 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
ZNF48Q96MX3 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
ZNF48Q96MX3 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
ZNF48Q96MX3 PAN3-AS1-201ENST00000563843 1351 ntBASIC14.49□□□□□ -0.09
ZNF48Q96MX3 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
ZNF48Q96MX3 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
ZNF48Q96MX3 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
ZNF48Q96MX3 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC14.49□□□□□ -0.09
ZNF48Q96MX3 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC14.49□□□□□ -0.09
ZNF48Q96MX3 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC14.49□□□□□ -0.09
ZNF48Q96MX3 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
ZNF48Q96MX3 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
ZNF48Q96MX3 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
ZNF48Q96MX3 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
ZNF48Q96MX3 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC14.49□□□□□ -0.09
ZNF48Q96MX3 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC14.49□□□□□ -0.09
ZNF48Q96MX3 HIST2H3DP1-201ENST00000401004 416 ntBASIC14.49□□□□□ -0.09
ZNF48Q96MX3 RBM17P3-201ENST00000417687 1192 ntBASIC14.49□□□□□ -0.09
ZNF48Q96MX3 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC14.49□□□□□ -0.09
ZNF48Q96MX3 HNRNPDP1-201ENST00000439535 754 ntBASIC14.49□□□□□ -0.09
ZNF48Q96MX3 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
ZNF48Q96MX3 AC073648.2-201ENST00000510116 352 ntBASIC14.49□□□□□ -0.09
ZNF48Q96MX3 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC14.49□□□□□ -0.09
ZNF48Q96MX3 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC14.49□□□□□ -0.09
ZNF48Q96MX3 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC14.49□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 43.9 ms