Protein–RNA interactions for Protein: Q96FF9

CDCA5, Sororin, humanhuman

Predictions only

Length 252 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA5Q96FF9 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
CDCA5Q96FF9 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
CDCA5Q96FF9 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
CDCA5Q96FF9 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC20.75■□□□□ 0.91
CDCA5Q96FF9 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC20.75■□□□□ 0.91
CDCA5Q96FF9 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC20.75■□□□□ 0.91
CDCA5Q96FF9 AC068137.2-201ENST00000605408 478 ntBASIC20.75■□□□□ 0.91
CDCA5Q96FF9 REXO1L3P-201ENST00000622202 1288 ntBASIC20.75■□□□□ 0.91
CDCA5Q96FF9 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC20.75■□□□□ 0.91
CDCA5Q96FF9 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
CDCA5Q96FF9 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
CDCA5Q96FF9 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC20.75■□□□□ 0.91
CDCA5Q96FF9 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC20.75■□□□□ 0.91
CDCA5Q96FF9 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
CDCA5Q96FF9 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC20.74■□□□□ 0.91
CDCA5Q96FF9 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC20.74■□□□□ 0.91
CDCA5Q96FF9 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
CDCA5Q96FF9 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CDCA5Q96FF9 FAM86GP-201ENST00000448322 971 ntBASIC20.74■□□□□ 0.91
CDCA5Q96FF9 RAD51D-205ENST00000460118 1064 ntTSL 5 BASIC20.74■□□□□ 0.91
CDCA5Q96FF9 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC20.74■□□□□ 0.91
CDCA5Q96FF9 AC069262.1-201ENST00000539058 672 ntBASIC20.74■□□□□ 0.91
CDCA5Q96FF9 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
CDCA5Q96FF9 ANO7L1-203ENST00000602586 1720 ntBASIC20.74■□□□□ 0.91
CDCA5Q96FF9 AL353135.1-201ENST00000606729 504 ntBASIC20.74■□□□□ 0.91
CDCA5Q96FF9 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CDCA5Q96FF9 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC20.74■□□□□ 0.91
CDCA5Q96FF9 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
CDCA5Q96FF9 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
CDCA5Q96FF9 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC20.73■□□□□ 0.91
CDCA5Q96FF9 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC20.73■□□□□ 0.91
CDCA5Q96FF9 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CDCA5Q96FF9 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
CDCA5Q96FF9 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CDCA5Q96FF9 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CDCA5Q96FF9 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
CDCA5Q96FF9 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
CDCA5Q96FF9 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC20.73■□□□□ 0.91
CDCA5Q96FF9 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC20.73■□□□□ 0.91
CDCA5Q96FF9 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC20.73■□□□□ 0.91
CDCA5Q96FF9 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC20.73■□□□□ 0.91
CDCA5Q96FF9 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC20.73■□□□□ 0.91
CDCA5Q96FF9 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC20.73■□□□□ 0.91
CDCA5Q96FF9 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC20.73■□□□□ 0.91
CDCA5Q96FF9 AL390955.2-201ENST00000603032 514 ntBASIC20.73■□□□□ 0.91
CDCA5Q96FF9 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
CDCA5Q96FF9 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CDCA5Q96FF9 AL121761.2-201ENST00000598007 1648 ntBASIC20.73■□□□□ 0.91
CDCA5Q96FF9 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC20.73■□□□□ 0.91
CDCA5Q96FF9 AC097637.2-201ENST00000624096 1997 ntBASIC20.73■□□□□ 0.91
CDCA5Q96FF9 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CDCA5Q96FF9 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CDCA5Q96FF9 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CDCA5Q96FF9 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
CDCA5Q96FF9 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CDCA5Q96FF9 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
CDCA5Q96FF9 AC018445.3-201ENST00000624177 1945 ntBASIC20.72■□□□□ 0.91
CDCA5Q96FF9 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
CDCA5Q96FF9 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC20.72■□□□□ 0.91
CDCA5Q96FF9 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC20.72■□□□□ 0.91
CDCA5Q96FF9 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
CDCA5Q96FF9 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC20.72■□□□□ 0.91
CDCA5Q96FF9 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CDCA5Q96FF9 DUTP2-201ENST00000519164 463 ntBASIC20.72■□□□□ 0.91
CDCA5Q96FF9 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC20.72■□□□□ 0.91
CDCA5Q96FF9 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC20.72■□□□□ 0.91
CDCA5Q96FF9 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC20.72■□□□□ 0.91
CDCA5Q96FF9 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC20.72■□□□□ 0.91
CDCA5Q96FF9 AC093520.2-201ENST00000561830 333 ntBASIC20.72■□□□□ 0.91
CDCA5Q96FF9 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC20.72■□□□□ 0.91
CDCA5Q96FF9 AC109462.3-201ENST00000573934 613 ntBASIC20.72■□□□□ 0.91
CDCA5Q96FF9 TMED1-207ENST00000591695 809 ntTSL 5 BASIC20.72■□□□□ 0.91
CDCA5Q96FF9 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CDCA5Q96FF9 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC20.72■□□□□ 0.91
CDCA5Q96FF9 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
CDCA5Q96FF9 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC20.72■□□□□ 0.91
CDCA5Q96FF9 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC20.72■□□□□ 0.91
CDCA5Q96FF9 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
CDCA5Q96FF9 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
CDCA5Q96FF9 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC20.72■□□□□ 0.91
CDCA5Q96FF9 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CDCA5Q96FF9 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CDCA5Q96FF9 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
CDCA5Q96FF9 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CDCA5Q96FF9 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CDCA5Q96FF9 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
CDCA5Q96FF9 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CDCA5Q96FF9 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
CDCA5Q96FF9 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
CDCA5Q96FF9 AC104135.1-201ENST00000418001 763 ntTSL 5 BASIC20.71■□□□□ 0.91
CDCA5Q96FF9 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC20.71■□□□□ 0.91
CDCA5Q96FF9 AC190387.1-201ENST00000551683 408 ntBASIC20.71■□□□□ 0.91
CDCA5Q96FF9 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC20.71■□□□□ 0.91
CDCA5Q96FF9 MED16-214ENST00000617672 554 ntTSL 5 BASIC20.71■□□□□ 0.91
CDCA5Q96FF9 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC20.71■□□□□ 0.91
CDCA5Q96FF9 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC20.71■□□□□ 0.91
CDCA5Q96FF9 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC20.71■□□□□ 0.91
CDCA5Q96FF9 AF228730.6-201ENST00000641497 218 ntBASIC20.71■□□□□ 0.91
CDCA5Q96FF9 AC084121.3-201ENST00000641716 218 ntBASIC20.71■□□□□ 0.91
CDCA5Q96FF9 AC105233.6-201ENST00000642093 218 ntBASIC20.71■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 43.5 ms