Protein–RNA interactions for Protein: Q96EP0

RNF31, E3 ubiquitin-protein ligase RNF31, humanhuman

Predictions only

Length 1,072 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF31Q96EP0 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
RNF31Q96EP0 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
RNF31Q96EP0 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
RNF31Q96EP0 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC17.22■□□□□ 0.35
RNF31Q96EP0 KRT18P41-201ENST00000518924 1277 ntBASIC17.22■□□□□ 0.35
RNF31Q96EP0 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC17.22■□□□□ 0.35
RNF31Q96EP0 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC17.22■□□□□ 0.35
RNF31Q96EP0 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC17.22■□□□□ 0.35
RNF31Q96EP0 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
RNF31Q96EP0 AC005336.2-201ENST00000593183 939 ntBASIC17.22■□□□□ 0.35
RNF31Q96EP0 CALM3-211ENST00000598871 561 ntTSL 4 BASIC17.22■□□□□ 0.35
RNF31Q96EP0 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
RNF31Q96EP0 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC17.22■□□□□ 0.35
RNF31Q96EP0 AL121912.1-201ENST00000603683 238 ntBASIC17.22■□□□□ 0.35
RNF31Q96EP0 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
RNF31Q96EP0 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
RNF31Q96EP0 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
RNF31Q96EP0 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
RNF31Q96EP0 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
RNF31Q96EP0 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC17.22■□□□□ 0.35
RNF31Q96EP0 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
RNF31Q96EP0 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
RNF31Q96EP0 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC17.22■□□□□ 0.35
RNF31Q96EP0 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC17.22■□□□□ 0.35
RNF31Q96EP0 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
RNF31Q96EP0 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC17.21■□□□□ 0.35
RNF31Q96EP0 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC17.21■□□□□ 0.35
RNF31Q96EP0 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC17.21■□□□□ 0.35
RNF31Q96EP0 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC17.21■□□□□ 0.35
RNF31Q96EP0 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC17.21■□□□□ 0.35
RNF31Q96EP0 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
RNF31Q96EP0 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC17.21■□□□□ 0.35
RNF31Q96EP0 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC17.21■□□□□ 0.35
RNF31Q96EP0 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC17.21■□□□□ 0.35
RNF31Q96EP0 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
RNF31Q96EP0 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
RNF31Q96EP0 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
RNF31Q96EP0 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
RNF31Q96EP0 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
RNF31Q96EP0 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
RNF31Q96EP0 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
RNF31Q96EP0 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC17.21■□□□□ 0.35
RNF31Q96EP0 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC17.21■□□□□ 0.35
RNF31Q96EP0 CDV3-207ENST00000508481 661 ntTSL 3 BASIC17.21■□□□□ 0.35
RNF31Q96EP0 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
RNF31Q96EP0 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC17.21■□□□□ 0.35
RNF31Q96EP0 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC17.21■□□□□ 0.35
RNF31Q96EP0 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC17.21■□□□□ 0.35
RNF31Q96EP0 IGHV3OR16-7-201ENST00000604106 360 ntBASIC17.21■□□□□ 0.35
RNF31Q96EP0 ABBA01031661.1-201ENST00000634362 1253 ntBASIC17.21■□□□□ 0.35
RNF31Q96EP0 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
RNF31Q96EP0 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC17.21■□□□□ 0.35
RNF31Q96EP0 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC17.21■□□□□ 0.35
RNF31Q96EP0 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
RNF31Q96EP0 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
RNF31Q96EP0 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
RNF31Q96EP0 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
RNF31Q96EP0 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.34
RNF31Q96EP0 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC17.21■□□□□ 0.34
RNF31Q96EP0 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC17.21■□□□□ 0.34
RNF31Q96EP0 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC17.21■□□□□ 0.34
RNF31Q96EP0 COMP-202ENST00000425807 2292 ntTSL 2 BASIC17.21■□□□□ 0.34
RNF31Q96EP0 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.34
RNF31Q96EP0 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
RNF31Q96EP0 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
RNF31Q96EP0 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
RNF31Q96EP0 HR-201ENST00000312841 5351 ntTSL 5 BASIC17.2■□□□□ 0.34
RNF31Q96EP0 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
RNF31Q96EP0 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
RNF31Q96EP0 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC17.2■□□□□ 0.34
RNF31Q96EP0 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
RNF31Q96EP0 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
RNF31Q96EP0 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
RNF31Q96EP0 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC17.2■□□□□ 0.34
RNF31Q96EP0 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
RNF31Q96EP0 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
RNF31Q96EP0 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
RNF31Q96EP0 RCN1P2-201ENST00000398357 915 ntBASIC17.2■□□□□ 0.34
RNF31Q96EP0 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
RNF31Q96EP0 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC17.2■□□□□ 0.34
RNF31Q96EP0 THAP5-204ENST00000438865 868 ntTSL 2 BASIC17.2■□□□□ 0.34
RNF31Q96EP0 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC17.2■□□□□ 0.34
RNF31Q96EP0 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC17.2■□□□□ 0.34
RNF31Q96EP0 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
RNF31Q96EP0 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
RNF31Q96EP0 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC17.2■□□□□ 0.34
RNF31Q96EP0 AL591684.3-201ENST00000605187 298 ntBASIC17.2■□□□□ 0.34
RNF31Q96EP0 AC120114.3-201ENST00000611923 658 ntBASIC17.2■□□□□ 0.34
RNF31Q96EP0 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC17.2■□□□□ 0.34
RNF31Q96EP0 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
RNF31Q96EP0 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC17.2■□□□□ 0.34
RNF31Q96EP0 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
RNF31Q96EP0 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
RNF31Q96EP0 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC17.2■□□□□ 0.34
RNF31Q96EP0 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
RNF31Q96EP0 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC17.2■□□□□ 0.34
RNF31Q96EP0 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC17.2■□□□□ 0.34
RNF31Q96EP0 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
RNF31Q96EP0 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC17.2■□□□□ 0.34
RNF31Q96EP0 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC17.2■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 63.2 ms