Protein–RNA interactions for Protein: Q96CG3

TIFA, TRAF-interacting protein with FHA domain-containing protein A, humanhuman

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TIFAQ96CG3 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
TIFAQ96CG3 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
TIFAQ96CG3 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC19■□□□□ 0.63
TIFAQ96CG3 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC19■□□□□ 0.63
TIFAQ96CG3 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC19■□□□□ 0.63
TIFAQ96CG3 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
TIFAQ96CG3 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
TIFAQ96CG3 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC19■□□□□ 0.63
TIFAQ96CG3 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
TIFAQ96CG3 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
TIFAQ96CG3 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
TIFAQ96CG3 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC18.99■□□□□ 0.63
TIFAQ96CG3 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
TIFAQ96CG3 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC18.99■□□□□ 0.63
TIFAQ96CG3 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC18.99■□□□□ 0.63
TIFAQ96CG3 CABP5-201ENST00000293255 1257 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
TIFAQ96CG3 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
TIFAQ96CG3 EDF1-203ENST00000371649 790 ntTSL 2 BASIC18.99■□□□□ 0.63
TIFAQ96CG3 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC18.99■□□□□ 0.63
TIFAQ96CG3 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC18.99■□□□□ 0.63
TIFAQ96CG3 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC18.99■□□□□ 0.63
TIFAQ96CG3 POLD4-207ENST00000531239 584 ntTSL 2 BASIC18.99■□□□□ 0.63
TIFAQ96CG3 POLD4-211ENST00000539074 714 ntTSL 3 BASIC18.99■□□□□ 0.63
TIFAQ96CG3 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC18.99■□□□□ 0.63
TIFAQ96CG3 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC18.99■□□□□ 0.63
TIFAQ96CG3 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
TIFAQ96CG3 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
TIFAQ96CG3 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
TIFAQ96CG3 AL032819.2-201ENST00000624543 2162 ntBASIC18.99■□□□□ 0.63
TIFAQ96CG3 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC18.99■□□□□ 0.63
TIFAQ96CG3 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
TIFAQ96CG3 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
TIFAQ96CG3 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
TIFAQ96CG3 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
TIFAQ96CG3 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
TIFAQ96CG3 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
TIFAQ96CG3 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
TIFAQ96CG3 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
TIFAQ96CG3 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
TIFAQ96CG3 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC18.98■□□□□ 0.63
TIFAQ96CG3 RHOQP3-201ENST00000437982 621 ntBASIC18.98■□□□□ 0.63
TIFAQ96CG3 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC18.98■□□□□ 0.63
TIFAQ96CG3 TERF1P3-201ENST00000505638 1227 ntBASIC18.98■□□□□ 0.63
TIFAQ96CG3 AC022145.2-201ENST00000598203 171 ntBASIC18.98■□□□□ 0.63
TIFAQ96CG3 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
TIFAQ96CG3 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC18.98■□□□□ 0.63
TIFAQ96CG3 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC18.98■□□□□ 0.63
TIFAQ96CG3 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
TIFAQ96CG3 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
TIFAQ96CG3 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
TIFAQ96CG3 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
TIFAQ96CG3 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
TIFAQ96CG3 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
TIFAQ96CG3 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC18.98■□□□□ 0.63
TIFAQ96CG3 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC18.98■□□□□ 0.63
TIFAQ96CG3 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
TIFAQ96CG3 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
TIFAQ96CG3 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC18.98■□□□□ 0.63
TIFAQ96CG3 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC18.98■□□□□ 0.63
TIFAQ96CG3 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
TIFAQ96CG3 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
TIFAQ96CG3 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC18.97■□□□□ 0.63
TIFAQ96CG3 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
TIFAQ96CG3 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
TIFAQ96CG3 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
TIFAQ96CG3 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
TIFAQ96CG3 ADM-208ENST00000534464 1640 ntTSL 2 BASIC18.97■□□□□ 0.63
TIFAQ96CG3 AC005332.7-201ENST00000614046 2005 ntBASIC18.97■□□□□ 0.63
TIFAQ96CG3 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
TIFAQ96CG3 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
TIFAQ96CG3 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
TIFAQ96CG3 TMEM41A-201ENST00000296254 1060 ntTSL 2 BASIC18.97■□□□□ 0.63
TIFAQ96CG3 C10orf35-201ENST00000373279 1065 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
TIFAQ96CG3 AC096633.1-201ENST00000422446 749 ntBASIC18.97■□□□□ 0.63
TIFAQ96CG3 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
TIFAQ96CG3 AC007274.1-201ENST00000439805 662 ntBASIC18.97■□□□□ 0.63
TIFAQ96CG3 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC18.97■□□□□ 0.63
TIFAQ96CG3 AC067863.1-201ENST00000494933 530 ntBASIC18.97■□□□□ 0.63
TIFAQ96CG3 AC019103.1-201ENST00000503095 272 ntTSL 3 BASIC18.97■□□□□ 0.63
TIFAQ96CG3 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC18.97■□□□□ 0.63
TIFAQ96CG3 CHRNA5-203ENST00000559554 1051 ntTSL 3 BASIC18.97■□□□□ 0.63
TIFAQ96CG3 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC18.97■□□□□ 0.63
TIFAQ96CG3 AC007064.4-201ENST00000637740 555 ntBASIC18.97■□□□□ 0.63
TIFAQ96CG3 PIP4K2A-206ENST00000545335 1436 ntTSL 2 BASIC18.97■□□□□ 0.63
TIFAQ96CG3 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
TIFAQ96CG3 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
TIFAQ96CG3 AC010460.3-201ENST00000511359 1579 ntBASIC18.97■□□□□ 0.63
TIFAQ96CG3 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC18.97■□□□□ 0.63
TIFAQ96CG3 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
TIFAQ96CG3 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
TIFAQ96CG3 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
TIFAQ96CG3 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
TIFAQ96CG3 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC18.96■□□□□ 0.63
TIFAQ96CG3 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
TIFAQ96CG3 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
TIFAQ96CG3 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
TIFAQ96CG3 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC18.96■□□□□ 0.63
TIFAQ96CG3 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
TIFAQ96CG3 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
TIFAQ96CG3 HNRNPFP1-201ENST00000391730 1133 ntBASIC18.96■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 32.5 ms