Protein–RNA interactions for Protein: Q92499

DDX1, ATP-dependent RNA helicase DDX1, humanhuman

Known RBP Predictions only

Length 740 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX1Q92499 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC19■□□□□ 0.63
DDX1Q92499 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC19■□□□□ 0.63
DDX1Q92499 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC19■□□□□ 0.63
DDX1Q92499 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC19■□□□□ 0.63
DDX1Q92499 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
DDX1Q92499 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC19■□□□□ 0.63
DDX1Q92499 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC19■□□□□ 0.63
DDX1Q92499 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC19■□□□□ 0.63
DDX1Q92499 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
DDX1Q92499 UBC-206ENST00000538617 1303 ntTSL 5 BASIC19■□□□□ 0.63
DDX1Q92499 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
DDX1Q92499 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC18.99■□□□□ 0.63
DDX1Q92499 AC133963.1-201ENST00000504166 1679 ntBASIC18.99■□□□□ 0.63
DDX1Q92499 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
DDX1Q92499 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
DDX1Q92499 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
DDX1Q92499 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
DDX1Q92499 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
DDX1Q92499 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
DDX1Q92499 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
DDX1Q92499 AL645929.1-201ENST00000420084 975 ntBASIC18.99■□□□□ 0.63
DDX1Q92499 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC18.99■□□□□ 0.63
DDX1Q92499 DDX43P3-201ENST00000441064 443 ntBASIC18.99■□□□□ 0.63
DDX1Q92499 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC18.99■□□□□ 0.63
DDX1Q92499 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC18.99■□□□□ 0.63
DDX1Q92499 AC092329.2-201ENST00000598402 547 ntBASIC18.99■□□□□ 0.63
DDX1Q92499 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
DDX1Q92499 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
DDX1Q92499 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
DDX1Q92499 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
DDX1Q92499 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
DDX1Q92499 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
DDX1Q92499 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
DDX1Q92499 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
DDX1Q92499 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC18.99■□□□□ 0.63
DDX1Q92499 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
DDX1Q92499 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC18.98■□□□□ 0.63
DDX1Q92499 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
DDX1Q92499 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC18.98■□□□□ 0.63
DDX1Q92499 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC18.98■□□□□ 0.63
DDX1Q92499 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC18.98■□□□□ 0.63
DDX1Q92499 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC18.98■□□□□ 0.63
DDX1Q92499 AL645608.8-201ENST00000606034 2086 ntBASIC18.98■□□□□ 0.63
DDX1Q92499 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
DDX1Q92499 BAALC-202ENST00000306391 243 ntTSL 5 BASIC18.98■□□□□ 0.63
DDX1Q92499 BAALC-204ENST00000330955 222 ntTSL 5 BASIC18.98■□□□□ 0.63
DDX1Q92499 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
DDX1Q92499 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC18.98■□□□□ 0.63
DDX1Q92499 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
DDX1Q92499 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
DDX1Q92499 AC116407.2-201ENST00000613639 860 ntBASIC18.98■□□□□ 0.63
DDX1Q92499 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
DDX1Q92499 EML3-212ENST00000494176 2901 ntTSL 2 BASIC18.98■□□□□ 0.63
DDX1Q92499 EML3-216ENST00000529309 2909 ntTSL 2 BASIC18.98■□□□□ 0.63
DDX1Q92499 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC18.98■□□□□ 0.63
DDX1Q92499 HARS-201ENST00000307633 1780 ntTSL 2 BASIC18.98■□□□□ 0.63
DDX1Q92499 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
DDX1Q92499 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC18.98■□□□□ 0.63
DDX1Q92499 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
DDX1Q92499 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC18.98■□□□□ 0.63
DDX1Q92499 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
DDX1Q92499 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
DDX1Q92499 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC18.97■□□□□ 0.63
DDX1Q92499 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
DDX1Q92499 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
DDX1Q92499 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
DDX1Q92499 AC139713.2-201ENST00000641328 2723 ntBASIC18.97■□□□□ 0.63
DDX1Q92499 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
DDX1Q92499 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC18.97■□□□□ 0.63
DDX1Q92499 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
DDX1Q92499 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
DDX1Q92499 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
DDX1Q92499 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
DDX1Q92499 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
DDX1Q92499 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC18.97■□□□□ 0.63
DDX1Q92499 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC18.97■□□□□ 0.63
DDX1Q92499 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
DDX1Q92499 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC18.97■□□□□ 0.63
DDX1Q92499 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC18.97■□□□□ 0.63
DDX1Q92499 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC18.97■□□□□ 0.63
DDX1Q92499 AC008481.3-201ENST00000585656 727 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
DDX1Q92499 NPAP1P7-201ENST00000613027 823 ntBASIC18.97■□□□□ 0.63
DDX1Q92499 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
DDX1Q92499 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
DDX1Q92499 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
DDX1Q92499 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
DDX1Q92499 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC18.97■□□□□ 0.63
DDX1Q92499 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
DDX1Q92499 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC18.97■□□□□ 0.63
DDX1Q92499 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
DDX1Q92499 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC18.96■□□□□ 0.63
DDX1Q92499 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC18.96■□□□□ 0.63
DDX1Q92499 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
DDX1Q92499 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
DDX1Q92499 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
DDX1Q92499 CNP-204ENST00000472031 1019 ntTSL 2 BASIC18.96■□□□□ 0.63
DDX1Q92499 RN7SL606P-201ENST00000472779 293 ntBASIC18.96■□□□□ 0.63
DDX1Q92499 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
DDX1Q92499 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC18.96■□□□□ 0.63
DDX1Q92499 AC092119.3-201ENST00000612618 583 ntBASIC18.96■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 29.9 ms