Protein–RNA interactions for Protein: Q8WXH6

RAB40A, Ras-related protein Rab-40A, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40AQ8WXH6 AL049597.2-201ENST00000565575 961 ntBASIC15.72■□□□□ 0.11
RAB40AQ8WXH6 AL512604.3-201ENST00000569583 964 ntBASIC15.72■□□□□ 0.11
RAB40AQ8WXH6 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC15.72■□□□□ 0.11
RAB40AQ8WXH6 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC15.72■□□□□ 0.11
RAB40AQ8WXH6 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC15.72■□□□□ 0.11
RAB40AQ8WXH6 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
RAB40AQ8WXH6 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
RAB40AQ8WXH6 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
RAB40AQ8WXH6 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
RAB40AQ8WXH6 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC15.72■□□□□ 0.11
RAB40AQ8WXH6 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
RAB40AQ8WXH6 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
RAB40AQ8WXH6 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
RAB40AQ8WXH6 ORAI2-205ENST00000478730 5531 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
RAB40AQ8WXH6 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC15.72■□□□□ 0.11
RAB40AQ8WXH6 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC15.71■□□□□ 0.11
RAB40AQ8WXH6 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC15.71■□□□□ 0.11
RAB40AQ8WXH6 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
RAB40AQ8WXH6 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
RAB40AQ8WXH6 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC15.71■□□□□ 0.11
RAB40AQ8WXH6 EFCAB14-201ENST00000371933 5767 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
RAB40AQ8WXH6 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC15.71■□□□□ 0.11
RAB40AQ8WXH6 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
RAB40AQ8WXH6 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC15.71■□□□□ 0.11
RAB40AQ8WXH6 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
RAB40AQ8WXH6 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
RAB40AQ8WXH6 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
RAB40AQ8WXH6 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC15.71■□□□□ 0.11
RAB40AQ8WXH6 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
RAB40AQ8WXH6 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
RAB40AQ8WXH6 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC15.71■□□□□ 0.11
RAB40AQ8WXH6 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
RAB40AQ8WXH6 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC15.71■□□□□ 0.11
RAB40AQ8WXH6 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC15.71■□□□□ 0.11
RAB40AQ8WXH6 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC15.71■□□□□ 0.11
RAB40AQ8WXH6 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC15.71■□□□□ 0.11
RAB40AQ8WXH6 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC15.71■□□□□ 0.11
RAB40AQ8WXH6 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC15.71■□□□□ 0.11
RAB40AQ8WXH6 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
RAB40AQ8WXH6 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC15.71■□□□□ 0.11
RAB40AQ8WXH6 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
RAB40AQ8WXH6 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC15.71■□□□□ 0.11
RAB40AQ8WXH6 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
RAB40AQ8WXH6 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC15.71■□□□□ 0.11
RAB40AQ8WXH6 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
RAB40AQ8WXH6 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
RAB40AQ8WXH6 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
RAB40AQ8WXH6 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
RAB40AQ8WXH6 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
RAB40AQ8WXH6 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC15.71■□□□□ 0.11
RAB40AQ8WXH6 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
RAB40AQ8WXH6 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC15.71■□□□□ 0.1
RAB40AQ8WXH6 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC15.71■□□□□ 0.1
RAB40AQ8WXH6 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
RAB40AQ8WXH6 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
RAB40AQ8WXH6 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
RAB40AQ8WXH6 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC15.71■□□□□ 0.1
RAB40AQ8WXH6 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC15.71■□□□□ 0.1
RAB40AQ8WXH6 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
RAB40AQ8WXH6 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
RAB40AQ8WXH6 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
RAB40AQ8WXH6 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
RAB40AQ8WXH6 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
RAB40AQ8WXH6 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC15.7■□□□□ 0.1
RAB40AQ8WXH6 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC15.7■□□□□ 0.1
RAB40AQ8WXH6 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
RAB40AQ8WXH6 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC15.7■□□□□ 0.1
RAB40AQ8WXH6 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
RAB40AQ8WXH6 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
RAB40AQ8WXH6 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
RAB40AQ8WXH6 FAM83A-202ENST00000518448 5393 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
RAB40AQ8WXH6 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
RAB40AQ8WXH6 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
RAB40AQ8WXH6 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC15.7■□□□□ 0.1
RAB40AQ8WXH6 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC15.7■□□□□ 0.1
RAB40AQ8WXH6 BX664615.1-201ENST00000443558 458 ntBASIC15.7■□□□□ 0.1
RAB40AQ8WXH6 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC15.7■□□□□ 0.1
RAB40AQ8WXH6 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC15.7■□□□□ 0.1
RAB40AQ8WXH6 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC15.7■□□□□ 0.1
RAB40AQ8WXH6 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC15.7■□□□□ 0.1
RAB40AQ8WXH6 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC15.7■□□□□ 0.1
RAB40AQ8WXH6 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC15.7■□□□□ 0.1
RAB40AQ8WXH6 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
RAB40AQ8WXH6 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC15.7■□□□□ 0.1
RAB40AQ8WXH6 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
RAB40AQ8WXH6 ZBTB7C-201ENST00000535628 4818 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
RAB40AQ8WXH6 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
RAB40AQ8WXH6 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
RAB40AQ8WXH6 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC15.7■□□□□ 0.1
RAB40AQ8WXH6 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
RAB40AQ8WXH6 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC15.7■□□□□ 0.1
RAB40AQ8WXH6 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
RAB40AQ8WXH6 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
RAB40AQ8WXH6 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
RAB40AQ8WXH6 AL118508.1-201ENST00000613502 2345 ntBASIC15.69■□□□□ 0.1
RAB40AQ8WXH6 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
RAB40AQ8WXH6 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC15.69■□□□□ 0.1
RAB40AQ8WXH6 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
RAB40AQ8WXH6 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC15.69■□□□□ 0.1
RAB40AQ8WXH6 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 42.5 ms