Protein–RNA interactions for Protein: Q8WXC6

COPS9, COP9 signalosome complex subunit 9, humanhuman

Predictions only

Length 57 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPS9Q8WXC6 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
COPS9Q8WXC6 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC12.08□□□□□ -0.48
COPS9Q8WXC6 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
COPS9Q8WXC6 CNKSR2-203ENST00000425654 5668 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
COPS9Q8WXC6 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC12.08□□□□□ -0.48
COPS9Q8WXC6 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
COPS9Q8WXC6 MAMLD1-203ENST00000370401 4854 ntAPPRIS P3 TSL 5 BASIC12.08□□□□□ -0.48
COPS9Q8WXC6 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC12.08□□□□□ -0.48
COPS9Q8WXC6 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
COPS9Q8WXC6 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
COPS9Q8WXC6 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
COPS9Q8WXC6 SPPL2A-201ENST00000261854 7372 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
COPS9Q8WXC6 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
COPS9Q8WXC6 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC12.07□□□□□ -0.48
COPS9Q8WXC6 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
COPS9Q8WXC6 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
COPS9Q8WXC6 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
COPS9Q8WXC6 DOC2GP-204ENST00000639052 2548 ntBASIC12.07□□□□□ -0.48
COPS9Q8WXC6 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC12.07□□□□□ -0.48
COPS9Q8WXC6 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC12.07□□□□□ -0.48
COPS9Q8WXC6 CNTN2-201ENST00000331830 7999 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
COPS9Q8WXC6 BAG4-201ENST00000287322 4453 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
COPS9Q8WXC6 AL513477.1-201ENST00000602865 2407 ntBASIC12.07□□□□□ -0.48
COPS9Q8WXC6 PHACTR3-204ENST00000371015 2728 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
COPS9Q8WXC6 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
COPS9Q8WXC6 RUNDC3B-202ENST00000338056 4099 ntTSL 2 BASIC12.07□□□□□ -0.48
COPS9Q8WXC6 GPRIN1-201ENST00000303991 4211 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
COPS9Q8WXC6 SLC12A5-211ENST00000616933 6166 ntTSL 5 BASIC12.07□□□□□ -0.48
COPS9Q8WXC6 AFTPH-201ENST00000238855 4113 ntAPPRIS ALT1 TSL 5 BASIC12.07□□□□□ -0.48
COPS9Q8WXC6 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
COPS9Q8WXC6 AFF1-201ENST00000307808 9390 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
COPS9Q8WXC6 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
COPS9Q8WXC6 LINC00174-204ENST00000421767 4702 ntTSL 5 BASIC12.07□□□□□ -0.48
COPS9Q8WXC6 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
COPS9Q8WXC6 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC12.07□□□□□ -0.48
COPS9Q8WXC6 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC12.07□□□□□ -0.48
COPS9Q8WXC6 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC12.07□□□□□ -0.48
COPS9Q8WXC6 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC12.07□□□□□ -0.48
COPS9Q8WXC6 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC12.07□□□□□ -0.48
COPS9Q8WXC6 BID-214ENST00000617586 542 ntTSL 5 BASIC12.07□□□□□ -0.48
COPS9Q8WXC6 AC092437.1-201ENST00000624794 1048 ntBASIC12.07□□□□□ -0.48
COPS9Q8WXC6 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC12.07□□□□□ -0.48
COPS9Q8WXC6 KBTBD12-202ENST00000405109 5727 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
COPS9Q8WXC6 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
COPS9Q8WXC6 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
COPS9Q8WXC6 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
COPS9Q8WXC6 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
COPS9Q8WXC6 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
COPS9Q8WXC6 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
COPS9Q8WXC6 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC12.07□□□□□ -0.48
COPS9Q8WXC6 JADE2-201ENST00000282605 2748 ntAPPRIS P1 TSL 2 BASIC12.07□□□□□ -0.48
COPS9Q8WXC6 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC12.07□□□□□ -0.48
COPS9Q8WXC6 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
COPS9Q8WXC6 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
COPS9Q8WXC6 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
COPS9Q8WXC6 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC12.07□□□□□ -0.48
COPS9Q8WXC6 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
COPS9Q8WXC6 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
COPS9Q8WXC6 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC12.06□□□□□ -0.48
COPS9Q8WXC6 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC12.06□□□□□ -0.48
COPS9Q8WXC6 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
COPS9Q8WXC6 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
COPS9Q8WXC6 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC12.06□□□□□ -0.48
COPS9Q8WXC6 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC12.06□□□□□ -0.48
COPS9Q8WXC6 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC12.06□□□□□ -0.48
COPS9Q8WXC6 EML4-201ENST00000318522 5549 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
COPS9Q8WXC6 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
COPS9Q8WXC6 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
COPS9Q8WXC6 DTX3L-201ENST00000296161 5868 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
COPS9Q8WXC6 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
COPS9Q8WXC6 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC12.06□□□□□ -0.48
COPS9Q8WXC6 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
COPS9Q8WXC6 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
COPS9Q8WXC6 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC12.06□□□□□ -0.48
COPS9Q8WXC6 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
COPS9Q8WXC6 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC12.06□□□□□ -0.48
COPS9Q8WXC6 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC12.06□□□□□ -0.48
COPS9Q8WXC6 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
COPS9Q8WXC6 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
COPS9Q8WXC6 ISCU-212ENST00000547005 795 ntTSL 3 BASIC12.06□□□□□ -0.48
COPS9Q8WXC6 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC12.06□□□□□ -0.48
COPS9Q8WXC6 ADCY1-204ENST00000621543 1647 ntTSL 5 BASIC12.06□□□□□ -0.48
COPS9Q8WXC6 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC12.06□□□□□ -0.48
COPS9Q8WXC6 KIRREL1-204ENST00000368173 7519 ntTSL 2 BASIC12.06□□□□□ -0.48
COPS9Q8WXC6 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
COPS9Q8WXC6 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC12.06□□□□□ -0.48
COPS9Q8WXC6 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
COPS9Q8WXC6 MAP3K11-201ENST00000309100 3566 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
COPS9Q8WXC6 CSRNP2-201ENST00000228515 4471 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
COPS9Q8WXC6 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC12.06□□□□□ -0.48
COPS9Q8WXC6 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
COPS9Q8WXC6 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
COPS9Q8WXC6 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
COPS9Q8WXC6 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
COPS9Q8WXC6 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
COPS9Q8WXC6 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC12.06□□□□□ -0.48
COPS9Q8WXC6 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC12.06□□□□□ -0.48
COPS9Q8WXC6 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
COPS9Q8WXC6 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
COPS9Q8WXC6 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC12.06□□□□□ -0.48
Retrieved 100 of 98,524 protein–RNA pairs in 30.1 ms