Protein–RNA interactions for Protein: Q8NFR7

CCDC148, Coiled-coil domain-containing protein 148, humanhuman

Predictions only

Length 591 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC148Q8NFR7 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
CCDC148Q8NFR7 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
CCDC148Q8NFR7 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
CCDC148Q8NFR7 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
CCDC148Q8NFR7 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
CCDC148Q8NFR7 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
CCDC148Q8NFR7 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
CCDC148Q8NFR7 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
CCDC148Q8NFR7 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
CCDC148Q8NFR7 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
CCDC148Q8NFR7 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC20.57■□□□□ 0.88
CCDC148Q8NFR7 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC20.57■□□□□ 0.88
CCDC148Q8NFR7 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
CCDC148Q8NFR7 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
CCDC148Q8NFR7 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CCDC148Q8NFR7 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC20.57■□□□□ 0.88
CCDC148Q8NFR7 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
CCDC148Q8NFR7 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CCDC148Q8NFR7 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC20.57■□□□□ 0.88
CCDC148Q8NFR7 PXK-206ENST00000463280 2825 ntTSL 2 BASIC20.57■□□□□ 0.88
CCDC148Q8NFR7 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CCDC148Q8NFR7 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC20.57■□□□□ 0.88
CCDC148Q8NFR7 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CCDC148Q8NFR7 PPIH-202ENST00000372549 327 ntTSL 3 BASIC20.57■□□□□ 0.88
CCDC148Q8NFR7 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
CCDC148Q8NFR7 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC20.57■□□□□ 0.88
CCDC148Q8NFR7 AL845331.1-201ENST00000424978 1190 ntBASIC20.57■□□□□ 0.88
CCDC148Q8NFR7 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC20.57■□□□□ 0.88
CCDC148Q8NFR7 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC20.57■□□□□ 0.88
CCDC148Q8NFR7 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC20.57■□□□□ 0.88
CCDC148Q8NFR7 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC20.57■□□□□ 0.88
CCDC148Q8NFR7 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC20.57■□□□□ 0.88
CCDC148Q8NFR7 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC20.57■□□□□ 0.88
CCDC148Q8NFR7 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC20.57■□□□□ 0.88
CCDC148Q8NFR7 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC20.57■□□□□ 0.88
CCDC148Q8NFR7 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
CCDC148Q8NFR7 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CCDC148Q8NFR7 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
CCDC148Q8NFR7 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC20.56■□□□□ 0.88
CCDC148Q8NFR7 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CCDC148Q8NFR7 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
CCDC148Q8NFR7 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CCDC148Q8NFR7 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
CCDC148Q8NFR7 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CCDC148Q8NFR7 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CCDC148Q8NFR7 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CCDC148Q8NFR7 PCDHB18P-201ENST00000524813 2368 ntBASIC20.56■□□□□ 0.88
CCDC148Q8NFR7 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
CCDC148Q8NFR7 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
CCDC148Q8NFR7 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CCDC148Q8NFR7 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
CCDC148Q8NFR7 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC20.56■□□□□ 0.88
CCDC148Q8NFR7 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
CCDC148Q8NFR7 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
CCDC148Q8NFR7 IL11-204ENST00000590625 1028 ntTSL 2 BASIC20.56■□□□□ 0.88
CCDC148Q8NFR7 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
CCDC148Q8NFR7 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC20.56■□□□□ 0.88
CCDC148Q8NFR7 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
CCDC148Q8NFR7 AC008764.6-201ENST00000595909 2069 ntBASIC20.56■□□□□ 0.88
CCDC148Q8NFR7 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC20.56■□□□□ 0.88
CCDC148Q8NFR7 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CCDC148Q8NFR7 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CCDC148Q8NFR7 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CCDC148Q8NFR7 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CCDC148Q8NFR7 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
CCDC148Q8NFR7 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC20.56■□□□□ 0.88
CCDC148Q8NFR7 MED29-202ENST00000594368 1471 ntTSL 2 BASIC20.56■□□□□ 0.88
CCDC148Q8NFR7 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CCDC148Q8NFR7 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
CCDC148Q8NFR7 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC20.55■□□□□ 0.88
CCDC148Q8NFR7 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CCDC148Q8NFR7 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CCDC148Q8NFR7 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CCDC148Q8NFR7 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CCDC148Q8NFR7 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CCDC148Q8NFR7 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC20.55■□□□□ 0.88
CCDC148Q8NFR7 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CCDC148Q8NFR7 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CCDC148Q8NFR7 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CCDC148Q8NFR7 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
CCDC148Q8NFR7 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CCDC148Q8NFR7 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
CCDC148Q8NFR7 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
CCDC148Q8NFR7 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC20.55■□□□□ 0.88
CCDC148Q8NFR7 TOB2P1-201ENST00000469761 992 ntBASIC20.55■□□□□ 0.88
CCDC148Q8NFR7 MIR3180-1-201ENST00000580374 94 ntBASIC20.55■□□□□ 0.88
CCDC148Q8NFR7 MIR3180-3-201ENST00000584616 94 ntBASIC20.55■□□□□ 0.88
CCDC148Q8NFR7 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC20.55■□□□□ 0.88
CCDC148Q8NFR7 Z69720.1-201ENST00000601483 472 ntBASIC20.55■□□□□ 0.88
CCDC148Q8NFR7 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CCDC148Q8NFR7 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
CCDC148Q8NFR7 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC20.55■□□□□ 0.88
CCDC148Q8NFR7 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
CCDC148Q8NFR7 GATB-213ENST00000515812 1893 ntTSL 5 BASIC20.55■□□□□ 0.88
CCDC148Q8NFR7 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CCDC148Q8NFR7 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
CCDC148Q8NFR7 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
CCDC148Q8NFR7 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CCDC148Q8NFR7 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
CCDC148Q8NFR7 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 57 ms