Protein–RNA interactions for Protein: Q8NFH5

NUP35, Nucleoporin NUP53, humanhuman

Predictions only

Length 326 aa.

Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP35Q8NFH5 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC13.36□□□□□ -0.27
NUP35Q8NFH5 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
NUP35Q8NFH5 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
NUP35Q8NFH5 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
NUP35Q8NFH5 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
NUP35Q8NFH5 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
NUP35Q8NFH5 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
NUP35Q8NFH5 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
NUP35Q8NFH5 MIR149-201ENST00000384879 89 ntBASIC13.36□□□□□ -0.27
NUP35Q8NFH5 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC13.36□□□□□ -0.27
NUP35Q8NFH5 PTPA-216ENST00000432651 857 ntTSL 2 BASIC13.36□□□□□ -0.27
NUP35Q8NFH5 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC13.36□□□□□ -0.27
NUP35Q8NFH5 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC13.36□□□□□ -0.27
NUP35Q8NFH5 OR2A1-AS1-207ENST00000486094 819 ntBASIC13.36□□□□□ -0.27
NUP35Q8NFH5 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC13.36□□□□□ -0.27
NUP35Q8NFH5 PNMA6B-201ENST00000538162 1200 ntBASIC13.36□□□□□ -0.27
NUP35Q8NFH5 AC004264.1-201ENST00000608354 794 ntBASIC13.36□□□□□ -0.27
NUP35Q8NFH5 AC092118.2-201ENST00000613495 667 ntBASIC13.36□□□□□ -0.27
NUP35Q8NFH5 Six3os1_6.1-201ENST00000620790 196 ntBASIC13.36□□□□□ -0.27
NUP35Q8NFH5 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC13.36□□□□□ -0.27
NUP35Q8NFH5 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
NUP35Q8NFH5 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
NUP35Q8NFH5 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC13.36□□□□□ -0.27
NUP35Q8NFH5 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
NUP35Q8NFH5 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
NUP35Q8NFH5 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
NUP35Q8NFH5 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC13.36□□□□□ -0.27
NUP35Q8NFH5 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
NUP35Q8NFH5 ST3GAL2-201ENST00000342907 4450 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
NUP35Q8NFH5 AC100803.2-201ENST00000562459 1963 ntBASIC13.36□□□□□ -0.27
NUP35Q8NFH5 NKPD1-201ENST00000317951 4233 ntAPPRIS P1 TSL 2 BASIC13.36□□□□□ -0.27
NUP35Q8NFH5 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
NUP35Q8NFH5 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC13.36□□□□□ -0.27
NUP35Q8NFH5 DIDO1-207ENST00000395343 8477 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
NUP35Q8NFH5 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
NUP35Q8NFH5 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
NUP35Q8NFH5 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
NUP35Q8NFH5 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
NUP35Q8NFH5 NBPF21P-201ENST00000425093 1451 ntBASIC13.36□□□□□ -0.27
NUP35Q8NFH5 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC13.35□□□□□ -0.27
NUP35Q8NFH5 AC026691.1-201ENST00000602502 2017 ntBASIC13.35□□□□□ -0.27
NUP35Q8NFH5 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
NUP35Q8NFH5 RAI1-207ENST00000640861 5172 ntTSL 5 BASIC13.35□□□□□ -0.27
NUP35Q8NFH5 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC13.35□□□□□ -0.27
NUP35Q8NFH5 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC13.35□□□□□ -0.27
NUP35Q8NFH5 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
NUP35Q8NFH5 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC13.35□□□□□ -0.27
NUP35Q8NFH5 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC13.35□□□□□ -0.27
NUP35Q8NFH5 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
NUP35Q8NFH5 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
NUP35Q8NFH5 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
NUP35Q8NFH5 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
NUP35Q8NFH5 AL163051.1-201ENST00000569214 1512 ntBASIC13.35□□□□□ -0.27
NUP35Q8NFH5 GLUL-201ENST00000311223 4719 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
NUP35Q8NFH5 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC13.35□□□□□ -0.27
NUP35Q8NFH5 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC13.35□□□□□ -0.27
NUP35Q8NFH5 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
NUP35Q8NFH5 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
NUP35Q8NFH5 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
NUP35Q8NFH5 DERL1-203ENST00000419562 918 ntTSL 2 BASIC13.35□□□□□ -0.27
NUP35Q8NFH5 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC13.35□□□□□ -0.27
NUP35Q8NFH5 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC13.35□□□□□ -0.27
NUP35Q8NFH5 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
NUP35Q8NFH5 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
NUP35Q8NFH5 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC13.35□□□□□ -0.27
NUP35Q8NFH5 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC13.35□□□□□ -0.27
NUP35Q8NFH5 AC091874.3-201ENST00000512672 1195 ntBASIC13.35□□□□□ -0.27
NUP35Q8NFH5 PRKY-204ENST00000533551 1019 ntBASIC13.35□□□□□ -0.27
NUP35Q8NFH5 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC13.35□□□□□ -0.27
NUP35Q8NFH5 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC13.35□□□□□ -0.27
NUP35Q8NFH5 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC13.35□□□□□ -0.27
NUP35Q8NFH5 MIR6821-201ENST00000617625 74 ntBASIC13.35□□□□□ -0.27
NUP35Q8NFH5 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC13.35□□□□□ -0.27
NUP35Q8NFH5 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC13.35□□□□□ -0.27
NUP35Q8NFH5 RIMS1-210ENST00000491071 5047 ntTSL 5 BASIC13.35□□□□□ -0.27
NUP35Q8NFH5 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC13.35□□□□□ -0.27
NUP35Q8NFH5 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
NUP35Q8NFH5 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC13.35□□□□□ -0.27
NUP35Q8NFH5 NFATC4-210ENST00000554050 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
NUP35Q8NFH5 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
NUP35Q8NFH5 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
NUP35Q8NFH5 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC13.35□□□□□ -0.27
NUP35Q8NFH5 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC13.35□□□□□ -0.27
NUP35Q8NFH5 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC13.35□□□□□ -0.27
NUP35Q8NFH5 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC13.35□□□□□ -0.27
NUP35Q8NFH5 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
NUP35Q8NFH5 ICA1L-201ENST00000358299 3457 ntAPPRIS P1 TSL 2 BASIC13.34□□□□□ -0.27
NUP35Q8NFH5 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
NUP35Q8NFH5 LINC00554-201ENST00000564841 3011 ntBASIC13.34□□□□□ -0.27
NUP35Q8NFH5 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
NUP35Q8NFH5 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
NUP35Q8NFH5 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC13.34□□□□□ -0.27
NUP35Q8NFH5 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC13.34□□□□□ -0.27
NUP35Q8NFH5 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC13.34□□□□□ -0.27
NUP35Q8NFH5 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
NUP35Q8NFH5 IL12RB2-205ENST00000541374 3849 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
NUP35Q8NFH5 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
NUP35Q8NFH5 AC103702.1-201ENST00000548801 2630 ntBASIC13.34□□□□□ -0.27
NUP35Q8NFH5 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
NUP35Q8NFH5 SLC2A14-202ENST00000396589 2335 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 40.9 ms