Protein–RNA interactions for Protein: Q8NFH5

NUP35, Nucleoporin NUP53, humanhuman

Predictions only

Length 326 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP35Q8NFH5 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC13.36□□□□□ -0.27
NUP35Q8NFH5 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
NUP35Q8NFH5 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
NUP35Q8NFH5 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
NUP35Q8NFH5 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
NUP35Q8NFH5 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
NUP35Q8NFH5 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
NUP35Q8NFH5 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
NUP35Q8NFH5 MIR149-201ENST00000384879 89 ntBASIC13.36□□□□□ -0.27
NUP35Q8NFH5 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC13.36□□□□□ -0.27
NUP35Q8NFH5 PTPA-216ENST00000432651 857 ntTSL 2 BASIC13.36□□□□□ -0.27
NUP35Q8NFH5 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC13.36□□□□□ -0.27
NUP35Q8NFH5 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC13.36□□□□□ -0.27
NUP35Q8NFH5 OR2A1-AS1-207ENST00000486094 819 ntBASIC13.36□□□□□ -0.27
NUP35Q8NFH5 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC13.36□□□□□ -0.27
NUP35Q8NFH5 PNMA6B-201ENST00000538162 1200 ntBASIC13.36□□□□□ -0.27
NUP35Q8NFH5 AC004264.1-201ENST00000608354 794 ntBASIC13.36□□□□□ -0.27
NUP35Q8NFH5 AC092118.2-201ENST00000613495 667 ntBASIC13.36□□□□□ -0.27
NUP35Q8NFH5 Six3os1_6.1-201ENST00000620790 196 ntBASIC13.36□□□□□ -0.27
NUP35Q8NFH5 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC13.36□□□□□ -0.27
NUP35Q8NFH5 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
NUP35Q8NFH5 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
NUP35Q8NFH5 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC13.36□□□□□ -0.27
NUP35Q8NFH5 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
NUP35Q8NFH5 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
NUP35Q8NFH5 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
NUP35Q8NFH5 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC13.36□□□□□ -0.27
NUP35Q8NFH5 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
NUP35Q8NFH5 ST3GAL2-201ENST00000342907 4450 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
NUP35Q8NFH5 AC100803.2-201ENST00000562459 1963 ntBASIC13.36□□□□□ -0.27
NUP35Q8NFH5 NKPD1-201ENST00000317951 4233 ntAPPRIS P1 TSL 2 BASIC13.36□□□□□ -0.27
NUP35Q8NFH5 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
NUP35Q8NFH5 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC13.36□□□□□ -0.27
NUP35Q8NFH5 DIDO1-207ENST00000395343 8477 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
NUP35Q8NFH5 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
NUP35Q8NFH5 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
NUP35Q8NFH5 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
NUP35Q8NFH5 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
NUP35Q8NFH5 NBPF21P-201ENST00000425093 1451 ntBASIC13.36□□□□□ -0.27
NUP35Q8NFH5 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC13.35□□□□□ -0.27
NUP35Q8NFH5 AC026691.1-201ENST00000602502 2017 ntBASIC13.35□□□□□ -0.27
NUP35Q8NFH5 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
NUP35Q8NFH5 RAI1-207ENST00000640861 5172 ntTSL 5 BASIC13.35□□□□□ -0.27
NUP35Q8NFH5 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC13.35□□□□□ -0.27
NUP35Q8NFH5 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC13.35□□□□□ -0.27
NUP35Q8NFH5 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
NUP35Q8NFH5 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC13.35□□□□□ -0.27
NUP35Q8NFH5 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC13.35□□□□□ -0.27
NUP35Q8NFH5 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
NUP35Q8NFH5 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
NUP35Q8NFH5 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
NUP35Q8NFH5 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
NUP35Q8NFH5 AL163051.1-201ENST00000569214 1512 ntBASIC13.35□□□□□ -0.27
NUP35Q8NFH5 GLUL-201ENST00000311223 4719 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
NUP35Q8NFH5 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC13.35□□□□□ -0.27
NUP35Q8NFH5 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC13.35□□□□□ -0.27
NUP35Q8NFH5 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
NUP35Q8NFH5 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
NUP35Q8NFH5 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
NUP35Q8NFH5 DERL1-203ENST00000419562 918 ntTSL 2 BASIC13.35□□□□□ -0.27
NUP35Q8NFH5 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC13.35□□□□□ -0.27
NUP35Q8NFH5 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC13.35□□□□□ -0.27
NUP35Q8NFH5 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
NUP35Q8NFH5 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
NUP35Q8NFH5 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC13.35□□□□□ -0.27
NUP35Q8NFH5 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC13.35□□□□□ -0.27
NUP35Q8NFH5 AC091874.3-201ENST00000512672 1195 ntBASIC13.35□□□□□ -0.27
NUP35Q8NFH5 PRKY-204ENST00000533551 1019 ntBASIC13.35□□□□□ -0.27
NUP35Q8NFH5 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC13.35□□□□□ -0.27
NUP35Q8NFH5 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC13.35□□□□□ -0.27
NUP35Q8NFH5 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC13.35□□□□□ -0.27
NUP35Q8NFH5 MIR6821-201ENST00000617625 74 ntBASIC13.35□□□□□ -0.27
NUP35Q8NFH5 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC13.35□□□□□ -0.27
NUP35Q8NFH5 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC13.35□□□□□ -0.27
NUP35Q8NFH5 RIMS1-210ENST00000491071 5047 ntTSL 5 BASIC13.35□□□□□ -0.27
NUP35Q8NFH5 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC13.35□□□□□ -0.27
NUP35Q8NFH5 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
NUP35Q8NFH5 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC13.35□□□□□ -0.27
NUP35Q8NFH5 NFATC4-210ENST00000554050 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
NUP35Q8NFH5 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
NUP35Q8NFH5 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
NUP35Q8NFH5 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC13.35□□□□□ -0.27
NUP35Q8NFH5 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC13.35□□□□□ -0.27
NUP35Q8NFH5 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC13.35□□□□□ -0.27
NUP35Q8NFH5 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC13.35□□□□□ -0.27
NUP35Q8NFH5 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
NUP35Q8NFH5 ICA1L-201ENST00000358299 3457 ntAPPRIS P1 TSL 2 BASIC13.34□□□□□ -0.27
NUP35Q8NFH5 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
NUP35Q8NFH5 LINC00554-201ENST00000564841 3011 ntBASIC13.34□□□□□ -0.27
NUP35Q8NFH5 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
NUP35Q8NFH5 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
NUP35Q8NFH5 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC13.34□□□□□ -0.27
NUP35Q8NFH5 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC13.34□□□□□ -0.27
NUP35Q8NFH5 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC13.34□□□□□ -0.27
NUP35Q8NFH5 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
NUP35Q8NFH5 IL12RB2-205ENST00000541374 3849 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
NUP35Q8NFH5 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
NUP35Q8NFH5 AC103702.1-201ENST00000548801 2630 ntBASIC13.34□□□□□ -0.27
NUP35Q8NFH5 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
NUP35Q8NFH5 SLC2A14-202ENST00000396589 2335 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 40.9 ms