Protein–RNA interactions for Protein: Q8NF91

SYNE1, Nesprin-1, humanhuman

Known RBP Predictions only

Length 8,797 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1Q8NF91 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC5.52□□□□□ -1.53
SYNE1Q8NF91 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
SYNE1Q8NF91 ACBD5-202ENST00000375897 4173 ntAPPRIS ALT2 TSL 2 BASIC5.52□□□□□ -1.53
SYNE1Q8NF91 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
SYNE1Q8NF91 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC5.52□□□□□ -1.53
SYNE1Q8NF91 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC5.52□□□□□ -1.53
SYNE1Q8NF91 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC5.52□□□□□ -1.53
SYNE1Q8NF91 TEN1-204ENST00000588202 862 ntTSL 3 BASIC5.52□□□□□ -1.53
SYNE1Q8NF91 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
SYNE1Q8NF91 MIR7706-201ENST00000613747 67 ntBASIC5.52□□□□□ -1.53
SYNE1Q8NF91 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC5.52□□□□□ -1.53
SYNE1Q8NF91 FRMD5-201ENST00000402883 4091 ntTSL 5 BASIC5.52□□□□□ -1.53
SYNE1Q8NF91 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC5.52□□□□□ -1.53
SYNE1Q8NF91 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
SYNE1Q8NF91 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
SYNE1Q8NF91 FOXRED2-201ENST00000216187 3933 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
SYNE1Q8NF91 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC5.52□□□□□ -1.53
SYNE1Q8NF91 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
SYNE1Q8NF91 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC5.52□□□□□ -1.53
SYNE1Q8NF91 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
SYNE1Q8NF91 DDT-203ENST00000403754 569 ntTSL 3 BASIC5.52□□□□□ -1.53
SYNE1Q8NF91 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
SYNE1Q8NF91 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC5.52□□□□□ -1.53
SYNE1Q8NF91 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC5.52□□□□□ -1.53
SYNE1Q8NF91 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC5.52□□□□□ -1.53
SYNE1Q8NF91 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
SYNE1Q8NF91 GRIK5-204ENST00000593562 3308 ntAPPRIS P1 TSL 5 BASIC5.52□□□□□ -1.53
SYNE1Q8NF91 IRAK1-203ENST00000369980 3666 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
SYNE1Q8NF91 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC5.52□□□□□ -1.53
SYNE1Q8NF91 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC5.52□□□□□ -1.53
SYNE1Q8NF91 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
SYNE1Q8NF91 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
SYNE1Q8NF91 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC5.52□□□□□ -1.53
SYNE1Q8NF91 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC5.52□□□□□ -1.53
SYNE1Q8NF91 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
SYNE1Q8NF91 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC5.52□□□□□ -1.53
SYNE1Q8NF91 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC5.52□□□□□ -1.53
SYNE1Q8NF91 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
SYNE1Q8NF91 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
SYNE1Q8NF91 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC5.52□□□□□ -1.53
SYNE1Q8NF91 PM20D2-201ENST00000275072 4708 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
SYNE1Q8NF91 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC5.52□□□□□ -1.53
SYNE1Q8NF91 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC5.52□□□□□ -1.53
SYNE1Q8NF91 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
SYNE1Q8NF91 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
SYNE1Q8NF91 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC5.52□□□□□ -1.53
SYNE1Q8NF91 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC5.52□□□□□ -1.53
SYNE1Q8NF91 DACT1-202ENST00000395153 3734 ntAPPRIS ALT2 TSL 5 BASIC5.52□□□□□ -1.53
SYNE1Q8NF91 ICMT-201ENST00000343813 4771 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
SYNE1Q8NF91 RTN4RL1-201ENST00000331238 3625 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
SYNE1Q8NF91 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC5.52□□□□□ -1.53
SYNE1Q8NF91 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
SYNE1Q8NF91 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC5.52□□□□□ -1.53
SYNE1Q8NF91 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
SYNE1Q8NF91 AC120114.3-201ENST00000611923 658 ntBASIC5.52□□□□□ -1.53
SYNE1Q8NF91 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
SYNE1Q8NF91 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC5.52□□□□□ -1.53
SYNE1Q8NF91 PPIL6-202ENST00000424445 4031 ntTSL 5 BASIC5.52□□□□□ -1.53
SYNE1Q8NF91 AL499627.1-201ENST00000569373 2188 ntBASIC5.52□□□□□ -1.53
SYNE1Q8NF91 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC5.52□□□□□ -1.53
SYNE1Q8NF91 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC5.52□□□□□ -1.53
SYNE1Q8NF91 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC5.52□□□□□ -1.53
SYNE1Q8NF91 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC5.52□□□□□ -1.53
SYNE1Q8NF91 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
SYNE1Q8NF91 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
SYNE1Q8NF91 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC5.52□□□□□ -1.53
SYNE1Q8NF91 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC5.52□□□□□ -1.53
SYNE1Q8NF91 LSM5-204ENST00000409909 740 ntTSL 2 BASIC5.52□□□□□ -1.53
SYNE1Q8NF91 RN7SL606P-201ENST00000472779 293 ntBASIC5.52□□□□□ -1.53
SYNE1Q8NF91 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC5.52□□□□□ -1.53
SYNE1Q8NF91 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC5.52□□□□□ -1.53
SYNE1Q8NF91 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC5.52□□□□□ -1.53
SYNE1Q8NF91 GCLM-201ENST00000370238 4857 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
SYNE1Q8NF91 LCOR-202ENST00000356016 4834 ntAPPRIS P3 TSL 2 BASIC5.52□□□□□ -1.53
SYNE1Q8NF91 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
SYNE1Q8NF91 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC5.52□□□□□ -1.53
SYNE1Q8NF91 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC5.52□□□□□ -1.53
SYNE1Q8NF91 BCAR1-204ENST00000418647 3387 ntAPPRIS ALT2 TSL 2 BASIC5.52□□□□□ -1.53
SYNE1Q8NF91 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
SYNE1Q8NF91 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC5.52□□□□□ -1.53
SYNE1Q8NF91 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC5.52□□□□□ -1.53
SYNE1Q8NF91 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
SYNE1Q8NF91 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC5.52□□□□□ -1.53
SYNE1Q8NF91 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC5.52□□□□□ -1.53
SYNE1Q8NF91 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC5.52□□□□□ -1.53
SYNE1Q8NF91 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
SYNE1Q8NF91 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
SYNE1Q8NF91 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC5.52□□□□□ -1.53
SYNE1Q8NF91 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC5.52□□□□□ -1.53
SYNE1Q8NF91 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC5.52□□□□□ -1.53
SYNE1Q8NF91 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
SYNE1Q8NF91 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
SYNE1Q8NF91 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC5.52□□□□□ -1.53
SYNE1Q8NF91 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC5.52□□□□□ -1.53
SYNE1Q8NF91 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
SYNE1Q8NF91 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
SYNE1Q8NF91 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
SYNE1Q8NF91 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC5.52□□□□□ -1.53
SYNE1Q8NF91 RET-201ENST00000340058 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC5.52□□□□□ -1.53
SYNE1Q8NF91 NRG2-209ENST00000541337 3723 ntTSL 5 BASIC5.52□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 37.4 ms