Protein–RNA interactions for Protein: Q8N998

CCDC89, Coiled-coil domain-containing protein 89, humanhuman

Predictions only

Length 374 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC89Q8N998 FAM87A-204ENST00000613235 858 ntBASIC18.55■□□□□ 0.56
CCDC89Q8N998 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CCDC89Q8N998 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CCDC89Q8N998 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
CCDC89Q8N998 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
CCDC89Q8N998 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
CCDC89Q8N998 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CCDC89Q8N998 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CCDC89Q8N998 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CCDC89Q8N998 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
CCDC89Q8N998 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
CCDC89Q8N998 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
CCDC89Q8N998 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC18.55■□□□□ 0.56
CCDC89Q8N998 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
CCDC89Q8N998 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC18.54■□□□□ 0.56
CCDC89Q8N998 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
CCDC89Q8N998 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC18.54■□□□□ 0.56
CCDC89Q8N998 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CCDC89Q8N998 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CCDC89Q8N998 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
CCDC89Q8N998 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CCDC89Q8N998 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC18.54■□□□□ 0.56
CCDC89Q8N998 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC18.54■□□□□ 0.56
CCDC89Q8N998 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC18.54■□□□□ 0.56
CCDC89Q8N998 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
CCDC89Q8N998 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
CCDC89Q8N998 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CCDC89Q8N998 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CCDC89Q8N998 AP000523.1-201ENST00000398242 1049 ntBASIC18.54■□□□□ 0.56
CCDC89Q8N998 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
CCDC89Q8N998 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC18.54■□□□□ 0.56
CCDC89Q8N998 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CCDC89Q8N998 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC18.54■□□□□ 0.56
CCDC89Q8N998 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC18.54■□□□□ 0.56
CCDC89Q8N998 MIR3917-201ENST00000580971 93 ntBASIC18.54■□□□□ 0.56
CCDC89Q8N998 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC18.54■□□□□ 0.56
CCDC89Q8N998 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CCDC89Q8N998 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
CCDC89Q8N998 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
CCDC89Q8N998 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC18.54■□□□□ 0.56
CCDC89Q8N998 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
CCDC89Q8N998 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
CCDC89Q8N998 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC18.54■□□□□ 0.56
CCDC89Q8N998 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CCDC89Q8N998 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
CCDC89Q8N998 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CCDC89Q8N998 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC18.54■□□□□ 0.56
CCDC89Q8N998 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
CCDC89Q8N998 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CCDC89Q8N998 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CCDC89Q8N998 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
CCDC89Q8N998 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC18.53■□□□□ 0.56
CCDC89Q8N998 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC18.53■□□□□ 0.56
CCDC89Q8N998 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CCDC89Q8N998 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CCDC89Q8N998 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CCDC89Q8N998 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
CCDC89Q8N998 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CCDC89Q8N998 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
CCDC89Q8N998 CRAT-202ENST00000393384 973 ntTSL 2 BASIC18.53■□□□□ 0.56
CCDC89Q8N998 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC18.53■□□□□ 0.56
CCDC89Q8N998 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC18.53■□□□□ 0.56
CCDC89Q8N998 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC18.53■□□□□ 0.56
CCDC89Q8N998 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC18.53■□□□□ 0.56
CCDC89Q8N998 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC18.53■□□□□ 0.56
CCDC89Q8N998 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC18.53■□□□□ 0.56
CCDC89Q8N998 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
CCDC89Q8N998 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CCDC89Q8N998 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC18.53■□□□□ 0.56
CCDC89Q8N998 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC18.53■□□□□ 0.56
CCDC89Q8N998 AC080080.1-201ENST00000625121 2420 ntBASIC18.53■□□□□ 0.56
CCDC89Q8N998 AC100803.2-201ENST00000562459 1963 ntBASIC18.53■□□□□ 0.56
CCDC89Q8N998 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CCDC89Q8N998 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC18.53■□□□□ 0.56
CCDC89Q8N998 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC18.53■□□□□ 0.56
CCDC89Q8N998 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC18.53■□□□□ 0.56
CCDC89Q8N998 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
CCDC89Q8N998 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CCDC89Q8N998 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CCDC89Q8N998 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
CCDC89Q8N998 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC18.53■□□□□ 0.56
CCDC89Q8N998 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
CCDC89Q8N998 PBK-203ENST00000522944 1499 ntTSL 2 BASIC18.52■□□□□ 0.56
CCDC89Q8N998 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC18.52■□□□□ 0.56
CCDC89Q8N998 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC18.52■□□□□ 0.56
CCDC89Q8N998 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
CCDC89Q8N998 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC18.52■□□□□ 0.56
CCDC89Q8N998 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC18.52■□□□□ 0.56
CCDC89Q8N998 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC18.52■□□□□ 0.56
CCDC89Q8N998 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
CCDC89Q8N998 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC18.52■□□□□ 0.56
CCDC89Q8N998 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC18.52■□□□□ 0.56
CCDC89Q8N998 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
CCDC89Q8N998 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
CCDC89Q8N998 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC18.52■□□□□ 0.56
CCDC89Q8N998 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC18.52■□□□□ 0.56
CCDC89Q8N998 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
CCDC89Q8N998 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC18.52■□□□□ 0.56
CCDC89Q8N998 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
CCDC89Q8N998 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC18.52■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 35.3 ms