Protein–RNA interactions for Protein: Q8IYX3

CCDC116, Coiled-coil domain-containing protein 116, humanhuman

Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC116Q8IYX3 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC16.85■□□□□ 0.29
CCDC116Q8IYX3 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CCDC116Q8IYX3 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC16.85■□□□□ 0.29
CCDC116Q8IYX3 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
CCDC116Q8IYX3 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CCDC116Q8IYX3 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC16.85■□□□□ 0.29
CCDC116Q8IYX3 AL645929.1-201ENST00000420084 975 ntBASIC16.85■□□□□ 0.29
CCDC116Q8IYX3 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC16.85■□□□□ 0.29
CCDC116Q8IYX3 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC16.85■□□□□ 0.29
CCDC116Q8IYX3 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC16.85■□□□□ 0.29
CCDC116Q8IYX3 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
CCDC116Q8IYX3 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC16.85■□□□□ 0.29
CCDC116Q8IYX3 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC16.85■□□□□ 0.29
CCDC116Q8IYX3 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
CCDC116Q8IYX3 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC16.85■□□□□ 0.29
CCDC116Q8IYX3 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
CCDC116Q8IYX3 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
CCDC116Q8IYX3 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC16.85■□□□□ 0.29
CCDC116Q8IYX3 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
CCDC116Q8IYX3 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC16.84■□□□□ 0.29
CCDC116Q8IYX3 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CCDC116Q8IYX3 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
CCDC116Q8IYX3 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC16.84■□□□□ 0.29
CCDC116Q8IYX3 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CCDC116Q8IYX3 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
CCDC116Q8IYX3 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CCDC116Q8IYX3 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
CCDC116Q8IYX3 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CCDC116Q8IYX3 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CCDC116Q8IYX3 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
CCDC116Q8IYX3 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CCDC116Q8IYX3 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CCDC116Q8IYX3 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CCDC116Q8IYX3 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CCDC116Q8IYX3 AL031133.1-201ENST00000406807 723 ntBASIC16.84■□□□□ 0.29
CCDC116Q8IYX3 DAP-202ENST00000432074 1048 ntTSL 2 BASIC16.84■□□□□ 0.29
CCDC116Q8IYX3 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC16.84■□□□□ 0.29
CCDC116Q8IYX3 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC16.84■□□□□ 0.29
CCDC116Q8IYX3 NME3-204ENST00000563498 920 ntTSL 2 BASIC16.84■□□□□ 0.29
CCDC116Q8IYX3 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC16.84■□□□□ 0.29
CCDC116Q8IYX3 AL390719.2-201ENST00000606993 987 ntBASIC16.84■□□□□ 0.29
CCDC116Q8IYX3 Metazoa_SRP.96-201ENST00000621315 318 ntBASIC16.84■□□□□ 0.29
CCDC116Q8IYX3 WDR6-223ENST00000627177 207 ntTSL 2 BASIC16.84■□□□□ 0.29
CCDC116Q8IYX3 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CCDC116Q8IYX3 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CCDC116Q8IYX3 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CCDC116Q8IYX3 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC16.84■□□□□ 0.29
CCDC116Q8IYX3 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
CCDC116Q8IYX3 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CCDC116Q8IYX3 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC16.84■□□□□ 0.29
CCDC116Q8IYX3 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC16.84■□□□□ 0.29
CCDC116Q8IYX3 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
CCDC116Q8IYX3 LETM1P2-201ENST00000597330 2178 ntBASIC16.84■□□□□ 0.29
CCDC116Q8IYX3 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC16.84■□□□□ 0.29
CCDC116Q8IYX3 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CCDC116Q8IYX3 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
CCDC116Q8IYX3 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.29
CCDC116Q8IYX3 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC16.83■□□□□ 0.29
CCDC116Q8IYX3 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CCDC116Q8IYX3 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
CCDC116Q8IYX3 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
CCDC116Q8IYX3 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CCDC116Q8IYX3 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
CCDC116Q8IYX3 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
CCDC116Q8IYX3 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CCDC116Q8IYX3 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC16.83■□□□□ 0.28
CCDC116Q8IYX3 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
CCDC116Q8IYX3 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
CCDC116Q8IYX3 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
CCDC116Q8IYX3 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
CCDC116Q8IYX3 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC16.83■□□□□ 0.28
CCDC116Q8IYX3 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC16.83■□□□□ 0.28
CCDC116Q8IYX3 UBC-206ENST00000538617 1303 ntTSL 5 BASIC16.83■□□□□ 0.28
CCDC116Q8IYX3 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC16.83■□□□□ 0.28
CCDC116Q8IYX3 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC16.83■□□□□ 0.28
CCDC116Q8IYX3 NDUFV2-AS1-203ENST00000608008 779 ntBASIC16.83■□□□□ 0.28
CCDC116Q8IYX3 LINC00896-202ENST00000609602 2128 ntBASIC16.83■□□□□ 0.28
CCDC116Q8IYX3 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
CCDC116Q8IYX3 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
CCDC116Q8IYX3 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
CCDC116Q8IYX3 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
CCDC116Q8IYX3 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CCDC116Q8IYX3 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CCDC116Q8IYX3 FST-202ENST00000396947 2538 ntTSL 5 BASIC16.83■□□□□ 0.28
CCDC116Q8IYX3 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC16.82■□□□□ 0.28
CCDC116Q8IYX3 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CCDC116Q8IYX3 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CCDC116Q8IYX3 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CCDC116Q8IYX3 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
CCDC116Q8IYX3 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
CCDC116Q8IYX3 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CCDC116Q8IYX3 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CCDC116Q8IYX3 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CCDC116Q8IYX3 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CCDC116Q8IYX3 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
CCDC116Q8IYX3 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CCDC116Q8IYX3 DDT-203ENST00000403754 569 ntTSL 3 BASIC16.82■□□□□ 0.28
CCDC116Q8IYX3 DDT-206ENST00000430101 573 ntTSL 2 BASIC16.82■□□□□ 0.28
CCDC116Q8IYX3 AC068472.1-201ENST00000474589 881 ntBASIC16.82■□□□□ 0.28
CCDC116Q8IYX3 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC16.82■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 29.2 ms