Protein–RNA interactions for Protein: Q8IY18

SMC5, Structural maintenance of chromosomes protein 5, humanhuman

Predictions only

Length 1,101 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMC5Q8IY18 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
SMC5Q8IY18 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC22.06■■□□□ 1.12
SMC5Q8IY18 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
SMC5Q8IY18 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
SMC5Q8IY18 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
SMC5Q8IY18 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
SMC5Q8IY18 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
SMC5Q8IY18 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC22.06■■□□□ 1.12
SMC5Q8IY18 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC22.06■■□□□ 1.12
SMC5Q8IY18 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
SMC5Q8IY18 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
SMC5Q8IY18 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC22.06■■□□□ 1.12
SMC5Q8IY18 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC22.06■■□□□ 1.12
SMC5Q8IY18 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
SMC5Q8IY18 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC22.05■■□□□ 1.12
SMC5Q8IY18 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
SMC5Q8IY18 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC22.05■■□□□ 1.12
SMC5Q8IY18 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC22.05■■□□□ 1.12
SMC5Q8IY18 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC22.05■■□□□ 1.12
SMC5Q8IY18 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
SMC5Q8IY18 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC22.05■■□□□ 1.12
SMC5Q8IY18 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
SMC5Q8IY18 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC22.05■■□□□ 1.12
SMC5Q8IY18 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC22.05■■□□□ 1.12
SMC5Q8IY18 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC22.05■■□□□ 1.12
SMC5Q8IY18 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
SMC5Q8IY18 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC22.05■■□□□ 1.12
SMC5Q8IY18 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
SMC5Q8IY18 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
SMC5Q8IY18 AC097374.2-201ENST00000618617 1306 ntBASIC22.05■■□□□ 1.12
SMC5Q8IY18 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC22.04■■□□□ 1.12
SMC5Q8IY18 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC22.04■■□□□ 1.12
SMC5Q8IY18 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC22.04■■□□□ 1.12
SMC5Q8IY18 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
SMC5Q8IY18 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC22.04■■□□□ 1.12
SMC5Q8IY18 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
SMC5Q8IY18 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC22.04■■□□□ 1.12
SMC5Q8IY18 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC22.04■■□□□ 1.12
SMC5Q8IY18 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
SMC5Q8IY18 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC22.04■■□□□ 1.12
SMC5Q8IY18 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
SMC5Q8IY18 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
SMC5Q8IY18 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC22.04■■□□□ 1.12
SMC5Q8IY18 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
SMC5Q8IY18 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
SMC5Q8IY18 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
SMC5Q8IY18 AC022616.7-201ENST00000525383 220 ntBASIC22.04■■□□□ 1.12
SMC5Q8IY18 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC22.04■■□□□ 1.12
SMC5Q8IY18 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
SMC5Q8IY18 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC22.04■■□□□ 1.12
SMC5Q8IY18 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC22.04■■□□□ 1.12
SMC5Q8IY18 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC22.04■■□□□ 1.12
SMC5Q8IY18 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC22.04■■□□□ 1.12
SMC5Q8IY18 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
SMC5Q8IY18 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
SMC5Q8IY18 AC012313.1-201ENST00000593393 3059 ntBASIC22.04■■□□□ 1.12
SMC5Q8IY18 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
SMC5Q8IY18 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC22.04■■□□□ 1.12
SMC5Q8IY18 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC22.04■■□□□ 1.12
SMC5Q8IY18 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC22.04■■□□□ 1.12
SMC5Q8IY18 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
SMC5Q8IY18 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
SMC5Q8IY18 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC22.04■■□□□ 1.12
SMC5Q8IY18 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
SMC5Q8IY18 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
SMC5Q8IY18 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
SMC5Q8IY18 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
SMC5Q8IY18 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
SMC5Q8IY18 LYSMD4-203ENST00000378904 2122 ntBASIC22.03■■□□□ 1.12
SMC5Q8IY18 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
SMC5Q8IY18 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC22.03■■□□□ 1.12
SMC5Q8IY18 AL353801.3-201ENST00000609898 542 ntBASIC22.03■■□□□ 1.12
SMC5Q8IY18 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC22.03■■□□□ 1.12
SMC5Q8IY18 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC22.03■■□□□ 1.12
SMC5Q8IY18 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
SMC5Q8IY18 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC22.03■■□□□ 1.12
SMC5Q8IY18 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC22.03■■□□□ 1.12
SMC5Q8IY18 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC22.03■■□□□ 1.12
SMC5Q8IY18 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC22.03■■□□□ 1.12
SMC5Q8IY18 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
SMC5Q8IY18 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC22.03■■□□□ 1.12
SMC5Q8IY18 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
SMC5Q8IY18 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC22.03■■□□□ 1.12
SMC5Q8IY18 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC22.02■■□□□ 1.12
SMC5Q8IY18 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC22.02■■□□□ 1.12
SMC5Q8IY18 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC22.02■■□□□ 1.12
SMC5Q8IY18 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC22.02■■□□□ 1.12
SMC5Q8IY18 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC22.02■■□□□ 1.12
SMC5Q8IY18 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC22.02■■□□□ 1.12
SMC5Q8IY18 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC22.02■■□□□ 1.12
SMC5Q8IY18 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC22.02■■□□□ 1.12
SMC5Q8IY18 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC22.02■■□□□ 1.12
SMC5Q8IY18 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC22.02■■□□□ 1.12
SMC5Q8IY18 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
SMC5Q8IY18 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC22.02■■□□□ 1.12
SMC5Q8IY18 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC22.02■■□□□ 1.12
SMC5Q8IY18 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC22.02■■□□□ 1.12
SMC5Q8IY18 BAALC-202ENST00000306391 243 ntTSL 5 BASIC22.02■■□□□ 1.12
SMC5Q8IY18 BAALC-204ENST00000330955 222 ntTSL 5 BASIC22.02■■□□□ 1.12
SMC5Q8IY18 AC092647.4-201ENST00000457211 535 ntBASIC22.02■■□□□ 1.12
Retrieved 100 of 98,524 protein–RNA pairs in 31.4 ms