Protein–RNA interactions for Protein: Q8IXQ3

C9orf40, Uncharacterized protein C9orf40, humanhuman

Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf40Q8IXQ3 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC16.46■□□□□ 0.22
C9orf40Q8IXQ3 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.22
C9orf40Q8IXQ3 AC008764.6-201ENST00000595909 2069 ntBASIC16.46■□□□□ 0.22
C9orf40Q8IXQ3 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
C9orf40Q8IXQ3 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
C9orf40Q8IXQ3 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC16.45■□□□□ 0.22
C9orf40Q8IXQ3 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
C9orf40Q8IXQ3 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
C9orf40Q8IXQ3 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
C9orf40Q8IXQ3 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
C9orf40Q8IXQ3 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
C9orf40Q8IXQ3 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC16.45■□□□□ 0.22
C9orf40Q8IXQ3 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC16.45■□□□□ 0.22
C9orf40Q8IXQ3 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
C9orf40Q8IXQ3 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
C9orf40Q8IXQ3 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC16.45■□□□□ 0.22
C9orf40Q8IXQ3 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
C9orf40Q8IXQ3 CD276-203ENST00000537340 2439 ntTSL 2 BASIC16.45■□□□□ 0.22
C9orf40Q8IXQ3 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
C9orf40Q8IXQ3 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
C9orf40Q8IXQ3 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC16.45■□□□□ 0.22
C9orf40Q8IXQ3 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
C9orf40Q8IXQ3 AL450487.1-201ENST00000426799 995 ntBASIC16.45■□□□□ 0.22
C9orf40Q8IXQ3 THAP5-204ENST00000438865 868 ntTSL 2 BASIC16.45■□□□□ 0.22
C9orf40Q8IXQ3 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC16.45■□□□□ 0.22
C9orf40Q8IXQ3 KRT16P4-201ENST00000453883 522 ntBASIC16.45■□□□□ 0.22
C9orf40Q8IXQ3 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
C9orf40Q8IXQ3 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC16.45■□□□□ 0.22
C9orf40Q8IXQ3 CBFB-203ENST00000561924 584 ntTSL 5 BASIC16.45■□□□□ 0.22
C9orf40Q8IXQ3 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
C9orf40Q8IXQ3 MIR5100-201ENST00000579544 119 ntBASIC16.45■□□□□ 0.22
C9orf40Q8IXQ3 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC16.45■□□□□ 0.22
C9orf40Q8IXQ3 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
C9orf40Q8IXQ3 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
C9orf40Q8IXQ3 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
C9orf40Q8IXQ3 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
C9orf40Q8IXQ3 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
C9orf40Q8IXQ3 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC16.45■□□□□ 0.22
C9orf40Q8IXQ3 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC16.45■□□□□ 0.22
C9orf40Q8IXQ3 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
C9orf40Q8IXQ3 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
C9orf40Q8IXQ3 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
C9orf40Q8IXQ3 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
C9orf40Q8IXQ3 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
C9orf40Q8IXQ3 LETM1P2-201ENST00000597330 2178 ntBASIC16.44■□□□□ 0.22
C9orf40Q8IXQ3 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC16.44■□□□□ 0.22
C9orf40Q8IXQ3 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC16.44■□□□□ 0.22
C9orf40Q8IXQ3 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
C9orf40Q8IXQ3 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
C9orf40Q8IXQ3 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
C9orf40Q8IXQ3 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
C9orf40Q8IXQ3 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC16.44■□□□□ 0.22
C9orf40Q8IXQ3 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
C9orf40Q8IXQ3 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC16.44■□□□□ 0.22
C9orf40Q8IXQ3 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
C9orf40Q8IXQ3 FAM220CP-201ENST00000395253 831 ntBASIC16.44■□□□□ 0.22
C9orf40Q8IXQ3 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC16.44■□□□□ 0.22
C9orf40Q8IXQ3 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
C9orf40Q8IXQ3 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC16.44■□□□□ 0.22
C9orf40Q8IXQ3 SLC25A6P5-201ENST00000435663 894 ntBASIC16.44■□□□□ 0.22
C9orf40Q8IXQ3 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
C9orf40Q8IXQ3 UNC93B7-201ENST00000509439 705 ntBASIC16.44■□□□□ 0.22
C9orf40Q8IXQ3 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
C9orf40Q8IXQ3 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
C9orf40Q8IXQ3 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
C9orf40Q8IXQ3 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC16.44■□□□□ 0.22
C9orf40Q8IXQ3 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC16.44■□□□□ 0.22
C9orf40Q8IXQ3 IFNL4P1-201ENST00000607083 540 ntBASIC16.44■□□□□ 0.22
C9orf40Q8IXQ3 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
C9orf40Q8IXQ3 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
C9orf40Q8IXQ3 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC16.44■□□□□ 0.22
C9orf40Q8IXQ3 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC16.44■□□□□ 0.22
C9orf40Q8IXQ3 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
C9orf40Q8IXQ3 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
C9orf40Q8IXQ3 AC012317.2-201ENST00000623305 2251 ntBASIC16.44■□□□□ 0.22
C9orf40Q8IXQ3 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
C9orf40Q8IXQ3 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC16.44■□□□□ 0.22
C9orf40Q8IXQ3 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
C9orf40Q8IXQ3 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
C9orf40Q8IXQ3 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
C9orf40Q8IXQ3 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
C9orf40Q8IXQ3 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC16.43■□□□□ 0.22
C9orf40Q8IXQ3 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
C9orf40Q8IXQ3 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
C9orf40Q8IXQ3 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC16.43■□□□□ 0.22
C9orf40Q8IXQ3 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
C9orf40Q8IXQ3 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC16.43■□□□□ 0.22
C9orf40Q8IXQ3 AC018470.1-201ENST00000624790 3129 ntBASIC16.43■□□□□ 0.22
C9orf40Q8IXQ3 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
C9orf40Q8IXQ3 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
C9orf40Q8IXQ3 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
C9orf40Q8IXQ3 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
C9orf40Q8IXQ3 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC16.43■□□□□ 0.22
C9orf40Q8IXQ3 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC16.43■□□□□ 0.22
C9orf40Q8IXQ3 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC16.43■□□□□ 0.22
C9orf40Q8IXQ3 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC16.43■□□□□ 0.22
C9orf40Q8IXQ3 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC16.43■□□□□ 0.22
C9orf40Q8IXQ3 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC16.43■□□□□ 0.22
C9orf40Q8IXQ3 AL591684.3-201ENST00000605187 298 ntBASIC16.43■□□□□ 0.22
C9orf40Q8IXQ3 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC16.43■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 48.9 ms