Protein–RNA interactions for Protein: Q8IWA6

CCDC60, Coiled-coil domain-containing protein 60, humanhuman

Predicted RBP Predictions only

Length 550 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60Q8IWA6 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC19.79■□□□□ 0.76
CCDC60Q8IWA6 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
CCDC60Q8IWA6 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC19.79■□□□□ 0.76
CCDC60Q8IWA6 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC19.79■□□□□ 0.76
CCDC60Q8IWA6 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
CCDC60Q8IWA6 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC19.79■□□□□ 0.76
CCDC60Q8IWA6 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CCDC60Q8IWA6 AL356309.3-201ENST00000624132 1934 ntBASIC19.79■□□□□ 0.76
CCDC60Q8IWA6 ABALON-201ENST00000629058 1903 ntBASIC19.79■□□□□ 0.76
CCDC60Q8IWA6 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC19.79■□□□□ 0.76
CCDC60Q8IWA6 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CCDC60Q8IWA6 SRP19-202ENST00000445150 833 ntTSL 2 BASIC19.79■□□□□ 0.76
CCDC60Q8IWA6 SCARNA2-201ENST00000458748 420 ntBASIC19.79■□□□□ 0.76
CCDC60Q8IWA6 AC073648.2-201ENST00000510116 352 ntBASIC19.79■□□□□ 0.76
CCDC60Q8IWA6 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC19.79■□□□□ 0.76
CCDC60Q8IWA6 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
CCDC60Q8IWA6 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
CCDC60Q8IWA6 AP001005.1-201ENST00000571755 1248 ntBASIC19.79■□□□□ 0.76
CCDC60Q8IWA6 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC19.79■□□□□ 0.76
CCDC60Q8IWA6 AL049840.3-201ENST00000602669 611 ntBASIC19.79■□□□□ 0.76
CCDC60Q8IWA6 MIR7706-201ENST00000613747 67 ntBASIC19.79■□□□□ 0.76
CCDC60Q8IWA6 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
CCDC60Q8IWA6 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
CCDC60Q8IWA6 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
CCDC60Q8IWA6 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC19.79■□□□□ 0.76
CCDC60Q8IWA6 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC19.79■□□□□ 0.76
CCDC60Q8IWA6 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC19.79■□□□□ 0.76
CCDC60Q8IWA6 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
CCDC60Q8IWA6 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CCDC60Q8IWA6 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC19.79■□□□□ 0.76
CCDC60Q8IWA6 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CCDC60Q8IWA6 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
CCDC60Q8IWA6 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CCDC60Q8IWA6 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CCDC60Q8IWA6 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
CCDC60Q8IWA6 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CCDC60Q8IWA6 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
CCDC60Q8IWA6 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
CCDC60Q8IWA6 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CCDC60Q8IWA6 PXK-206ENST00000463280 2825 ntTSL 2 BASIC19.78■□□□□ 0.76
CCDC60Q8IWA6 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC19.78■□□□□ 0.76
CCDC60Q8IWA6 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC19.78■□□□□ 0.76
CCDC60Q8IWA6 TLE1-202ENST00000376484 666 ntTSL 3 BASIC19.78■□□□□ 0.76
CCDC60Q8IWA6 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC19.78■□□□□ 0.76
CCDC60Q8IWA6 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC19.78■□□□□ 0.76
CCDC60Q8IWA6 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC19.78■□□□□ 0.76
CCDC60Q8IWA6 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC19.78■□□□□ 0.76
CCDC60Q8IWA6 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC19.78■□□□□ 0.76
CCDC60Q8IWA6 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC19.78■□□□□ 0.76
CCDC60Q8IWA6 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
CCDC60Q8IWA6 NKAPP1-205ENST00000585790 367 ntBASIC19.78■□□□□ 0.76
CCDC60Q8IWA6 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
CCDC60Q8IWA6 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
CCDC60Q8IWA6 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CCDC60Q8IWA6 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC19.78■□□□□ 0.76
CCDC60Q8IWA6 AC138028.4-201ENST00000564984 1845 ntBASIC19.78■□□□□ 0.76
CCDC60Q8IWA6 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
CCDC60Q8IWA6 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC19.78■□□□□ 0.76
CCDC60Q8IWA6 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CCDC60Q8IWA6 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CCDC60Q8IWA6 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC19.78■□□□□ 0.76
CCDC60Q8IWA6 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC19.78■□□□□ 0.76
CCDC60Q8IWA6 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
CCDC60Q8IWA6 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC19.77■□□□□ 0.76
CCDC60Q8IWA6 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC19.77■□□□□ 0.76
CCDC60Q8IWA6 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC19.77■□□□□ 0.76
CCDC60Q8IWA6 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
CCDC60Q8IWA6 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
CCDC60Q8IWA6 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CCDC60Q8IWA6 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
CCDC60Q8IWA6 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
CCDC60Q8IWA6 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
CCDC60Q8IWA6 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC19.77■□□□□ 0.76
CCDC60Q8IWA6 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CCDC60Q8IWA6 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC19.77■□□□□ 0.76
CCDC60Q8IWA6 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.76
CCDC60Q8IWA6 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.76
CCDC60Q8IWA6 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC19.77■□□□□ 0.76
CCDC60Q8IWA6 TMED1-207ENST00000591695 809 ntTSL 5 BASIC19.77■□□□□ 0.76
CCDC60Q8IWA6 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC19.77■□□□□ 0.76
CCDC60Q8IWA6 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CCDC60Q8IWA6 AL139288.1-201ENST00000623748 933 ntBASIC19.77■□□□□ 0.76
CCDC60Q8IWA6 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC19.77■□□□□ 0.76
CCDC60Q8IWA6 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC19.77■□□□□ 0.76
CCDC60Q8IWA6 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.76
CCDC60Q8IWA6 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC19.77■□□□□ 0.76
CCDC60Q8IWA6 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.76
CCDC60Q8IWA6 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
CCDC60Q8IWA6 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CCDC60Q8IWA6 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC19.77■□□□□ 0.76
CCDC60Q8IWA6 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.76
CCDC60Q8IWA6 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
CCDC60Q8IWA6 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.75
CCDC60Q8IWA6 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC19.77■□□□□ 0.75
CCDC60Q8IWA6 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
CCDC60Q8IWA6 COMP-202ENST00000425807 2292 ntTSL 2 BASIC19.77■□□□□ 0.75
CCDC60Q8IWA6 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC19.77■□□□□ 0.75
CCDC60Q8IWA6 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
CCDC60Q8IWA6 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC19.77■□□□□ 0.75
CCDC60Q8IWA6 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 23 ms