Protein–RNA interactions for Protein: Q86UQ8

NFE4, Transcription factor NF-E4, humanhuman

Predictions only

Length 179 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NFE4Q86UQ8 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
NFE4Q86UQ8 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
NFE4Q86UQ8 WAC-203ENST00000354911 3042 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
NFE4Q86UQ8 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
NFE4Q86UQ8 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
NFE4Q86UQ8 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
NFE4Q86UQ8 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
NFE4Q86UQ8 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC12.82□□□□□ -0.36
NFE4Q86UQ8 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
NFE4Q86UQ8 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
NFE4Q86UQ8 TERF1P1-201ENST00000311003 1181 ntBASIC12.82□□□□□ -0.36
NFE4Q86UQ8 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
NFE4Q86UQ8 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
NFE4Q86UQ8 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC12.82□□□□□ -0.36
NFE4Q86UQ8 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC12.82□□□□□ -0.36
NFE4Q86UQ8 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC12.82□□□□□ -0.36
NFE4Q86UQ8 AP000523.1-201ENST00000398242 1049 ntBASIC12.82□□□□□ -0.36
NFE4Q86UQ8 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC12.82□□□□□ -0.36
NFE4Q86UQ8 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
NFE4Q86UQ8 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
NFE4Q86UQ8 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC12.82□□□□□ -0.36
NFE4Q86UQ8 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
NFE4Q86UQ8 FDX2-206ENST00000492239 773 ntTSL 2 BASIC12.82□□□□□ -0.36
NFE4Q86UQ8 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC12.82□□□□□ -0.36
NFE4Q86UQ8 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC12.82□□□□□ -0.36
NFE4Q86UQ8 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC12.82□□□□□ -0.36
NFE4Q86UQ8 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC12.82□□□□□ -0.36
NFE4Q86UQ8 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC12.82□□□□□ -0.36
NFE4Q86UQ8 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
NFE4Q86UQ8 MNT-208ENST00000575394 606 ntTSL 4 BASIC12.82□□□□□ -0.36
NFE4Q86UQ8 RMI2-205ENST00000576027 818 ntTSL 2 BASIC12.82□□□□□ -0.36
NFE4Q86UQ8 RN7SL850P-201ENST00000579959 291 ntBASIC12.82□□□□□ -0.36
NFE4Q86UQ8 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC12.82□□□□□ -0.36
NFE4Q86UQ8 AC010331.1-201ENST00000611423 582 ntBASIC12.82□□□□□ -0.36
NFE4Q86UQ8 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC12.82□□□□□ -0.36
NFE4Q86UQ8 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
NFE4Q86UQ8 CDK16-202ENST00000357227 3144 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
NFE4Q86UQ8 LGALS8-AS1-201ENST00000487567 1457 ntBASIC12.82□□□□□ -0.36
NFE4Q86UQ8 HLA-DQB1-201ENST00000374943 1656 ntBASIC12.82□□□□□ -0.36
NFE4Q86UQ8 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
NFE4Q86UQ8 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC12.82□□□□□ -0.36
NFE4Q86UQ8 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
NFE4Q86UQ8 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
NFE4Q86UQ8 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC12.82□□□□□ -0.36
NFE4Q86UQ8 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC12.82□□□□□ -0.36
NFE4Q86UQ8 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
NFE4Q86UQ8 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
NFE4Q86UQ8 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
NFE4Q86UQ8 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC12.82□□□□□ -0.36
NFE4Q86UQ8 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC12.82□□□□□ -0.36
NFE4Q86UQ8 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
NFE4Q86UQ8 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC12.82□□□□□ -0.36
NFE4Q86UQ8 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
NFE4Q86UQ8 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC12.81□□□□□ -0.36
NFE4Q86UQ8 HARS-201ENST00000307633 1780 ntTSL 2 BASIC12.81□□□□□ -0.36
NFE4Q86UQ8 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
NFE4Q86UQ8 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
NFE4Q86UQ8 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC12.81□□□□□ -0.36
NFE4Q86UQ8 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
NFE4Q86UQ8 PRMT6-201ENST00000370078 2616 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
NFE4Q86UQ8 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC12.81□□□□□ -0.36
NFE4Q86UQ8 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
NFE4Q86UQ8 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
NFE4Q86UQ8 AL023806.1-201ENST00000603994 1649 ntBASIC12.81□□□□□ -0.36
NFE4Q86UQ8 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC12.81□□□□□ -0.36
NFE4Q86UQ8 SIK3-205ENST00000446921 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
NFE4Q86UQ8 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
NFE4Q86UQ8 FLJ38576-201ENST00000623820 2459 ntBASIC12.81□□□□□ -0.36
NFE4Q86UQ8 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
NFE4Q86UQ8 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC12.81□□□□□ -0.36
NFE4Q86UQ8 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC12.81□□□□□ -0.36
NFE4Q86UQ8 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
NFE4Q86UQ8 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
NFE4Q86UQ8 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC12.81□□□□□ -0.36
NFE4Q86UQ8 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
NFE4Q86UQ8 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
NFE4Q86UQ8 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC12.81□□□□□ -0.36
NFE4Q86UQ8 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
NFE4Q86UQ8 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
NFE4Q86UQ8 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
NFE4Q86UQ8 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
NFE4Q86UQ8 BX664615.1-201ENST00000443558 458 ntBASIC12.81□□□□□ -0.36
NFE4Q86UQ8 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
NFE4Q86UQ8 AC008040.2-201ENST00000461049 708 ntBASIC12.81□□□□□ -0.36
NFE4Q86UQ8 ECEL1P2-202ENST00000465689 757 ntBASIC12.81□□□□□ -0.36
NFE4Q86UQ8 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC12.81□□□□□ -0.36
NFE4Q86UQ8 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC12.81□□□□□ -0.36
NFE4Q86UQ8 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC12.81□□□□□ -0.36
NFE4Q86UQ8 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
NFE4Q86UQ8 AL353719.1-201ENST00000566847 864 ntBASIC12.81□□□□□ -0.36
NFE4Q86UQ8 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC12.81□□□□□ -0.36
NFE4Q86UQ8 AL031432.5-201ENST00000641059 760 ntBASIC12.81□□□□□ -0.36
NFE4Q86UQ8 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
NFE4Q86UQ8 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC12.81□□□□□ -0.36
NFE4Q86UQ8 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
NFE4Q86UQ8 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
NFE4Q86UQ8 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
NFE4Q86UQ8 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
NFE4Q86UQ8 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
NFE4Q86UQ8 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 32.7 ms