Protein–RNA interactions for Protein: Q7Z407

CSMD3, CUB and sushi domain-containing protein 3, humanhuman

Predictions only

Length 3,707 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3Q7Z407 AL121761.2-201ENST00000598007 1648 ntBASIC12.32□□□□□ -0.44
CSMD3Q7Z407 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC12.32□□□□□ -0.44
CSMD3Q7Z407 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC12.32□□□□□ -0.44
CSMD3Q7Z407 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC12.32□□□□□ -0.44
CSMD3Q7Z407 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC12.32□□□□□ -0.44
CSMD3Q7Z407 SRP19-202ENST00000445150 833 ntTSL 2 BASIC12.32□□□□□ -0.44
CSMD3Q7Z407 DUX4L27-201ENST00000554796 1261 ntBASIC12.32□□□□□ -0.44
CSMD3Q7Z407 DUT-210ENST00000559935 569 ntTSL 3 BASIC12.32□□□□□ -0.44
CSMD3Q7Z407 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC12.32□□□□□ -0.44
CSMD3Q7Z407 AC099522.2-201ENST00000607001 744 ntBASIC12.32□□□□□ -0.44
CSMD3Q7Z407 PGM5P2-202ENST00000637225 1043 ntBASIC12.32□□□□□ -0.44
CSMD3Q7Z407 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC12.32□□□□□ -0.44
CSMD3Q7Z407 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC12.32□□□□□ -0.44
CSMD3Q7Z407 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
CSMD3Q7Z407 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC12.32□□□□□ -0.44
CSMD3Q7Z407 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
CSMD3Q7Z407 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
CSMD3Q7Z407 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
CSMD3Q7Z407 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
CSMD3Q7Z407 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
CSMD3Q7Z407 AC018445.3-201ENST00000624177 1945 ntBASIC12.32□□□□□ -0.44
CSMD3Q7Z407 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC12.32□□□□□ -0.44
CSMD3Q7Z407 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC12.32□□□□□ -0.44
CSMD3Q7Z407 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
CSMD3Q7Z407 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC12.32□□□□□ -0.44
CSMD3Q7Z407 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC12.32□□□□□ -0.44
CSMD3Q7Z407 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC12.32□□□□□ -0.44
CSMD3Q7Z407 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC12.32□□□□□ -0.44
CSMD3Q7Z407 NEK7-201ENST00000367383 586 ntTSL 2 BASIC12.32□□□□□ -0.44
CSMD3Q7Z407 AC069262.1-201ENST00000539058 672 ntBASIC12.32□□□□□ -0.44
CSMD3Q7Z407 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC12.32□□□□□ -0.44
CSMD3Q7Z407 YTHDF3-AS1-201ENST00000603538 718 ntBASIC12.32□□□□□ -0.44
CSMD3Q7Z407 SNHG28-203ENST00000621242 708 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
CSMD3Q7Z407 PDGFA-201ENST00000354513 1308 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
CSMD3Q7Z407 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC12.31□□□□□ -0.44
CSMD3Q7Z407 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
CSMD3Q7Z407 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
CSMD3Q7Z407 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC12.31□□□□□ -0.44
CSMD3Q7Z407 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
CSMD3Q7Z407 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
CSMD3Q7Z407 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
CSMD3Q7Z407 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC12.31□□□□□ -0.44
CSMD3Q7Z407 AL020989.1-201ENST00000422979 469 ntBASIC12.31□□□□□ -0.44
CSMD3Q7Z407 NRK-203ENST00000536164 908 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
CSMD3Q7Z407 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC12.31□□□□□ -0.44
CSMD3Q7Z407 HFE2-206ENST00000634927 506 ntTSL 4 BASIC12.31□□□□□ -0.44
CSMD3Q7Z407 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC12.31□□□□□ -0.44
CSMD3Q7Z407 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
CSMD3Q7Z407 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
CSMD3Q7Z407 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC12.31□□□□□ -0.44
CSMD3Q7Z407 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC12.31□□□□□ -0.44
CSMD3Q7Z407 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
CSMD3Q7Z407 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
CSMD3Q7Z407 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
CSMD3Q7Z407 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC12.31□□□□□ -0.44
CSMD3Q7Z407 FAM221A-202ENST00000409192 888 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
CSMD3Q7Z407 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC12.31□□□□□ -0.44
CSMD3Q7Z407 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
CSMD3Q7Z407 MIR4751-201ENST00000578027 74 ntBASIC12.31□□□□□ -0.44
CSMD3Q7Z407 BSG-215ENST00000618006 1329 ntTSL 2 BASIC12.31□□□□□ -0.44
CSMD3Q7Z407 AC063926.2-201ENST00000623766 1308 ntBASIC12.31□□□□□ -0.44
CSMD3Q7Z407 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC12.31□□□□□ -0.44
CSMD3Q7Z407 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
CSMD3Q7Z407 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC12.31□□□□□ -0.44
CSMD3Q7Z407 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
CSMD3Q7Z407 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
CSMD3Q7Z407 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
CSMD3Q7Z407 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
CSMD3Q7Z407 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
CSMD3Q7Z407 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC12.31□□□□□ -0.44
CSMD3Q7Z407 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC12.31□□□□□ -0.44
CSMD3Q7Z407 CD8B-201ENST00000331469 832 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
CSMD3Q7Z407 TRAPPC3-203ENST00000373163 951 ntTSL 3 BASIC12.31□□□□□ -0.44
CSMD3Q7Z407 ACTG1P14-201ENST00000446382 1122 ntBASIC12.31□□□□□ -0.44
CSMD3Q7Z407 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC12.31□□□□□ -0.44
CSMD3Q7Z407 AP005018.1-201ENST00000525475 301 ntBASIC12.31□□□□□ -0.44
CSMD3Q7Z407 AL606495.2-201ENST00000605867 535 ntBASIC12.31□□□□□ -0.44
CSMD3Q7Z407 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
CSMD3Q7Z407 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
CSMD3Q7Z407 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
CSMD3Q7Z407 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
CSMD3Q7Z407 FUT8-AS1-201ENST00000621019 1521 ntBASIC12.3□□□□□ -0.44
CSMD3Q7Z407 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
CSMD3Q7Z407 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
CSMD3Q7Z407 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
CSMD3Q7Z407 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
CSMD3Q7Z407 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
CSMD3Q7Z407 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC12.3□□□□□ -0.44
CSMD3Q7Z407 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC12.3□□□□□ -0.44
CSMD3Q7Z407 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC12.3□□□□□ -0.44
CSMD3Q7Z407 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC12.3□□□□□ -0.44
CSMD3Q7Z407 LINC02387-201ENST00000541749 868 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
CSMD3Q7Z407 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC12.3□□□□□ -0.44
CSMD3Q7Z407 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC12.3□□□□□ -0.44
CSMD3Q7Z407 AL805961.1-202ENST00000641562 540 ntBASIC12.3□□□□□ -0.44
CSMD3Q7Z407 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
CSMD3Q7Z407 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC12.3□□□□□ -0.44
CSMD3Q7Z407 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
CSMD3Q7Z407 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC12.3□□□□□ -0.44
CSMD3Q7Z407 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC12.3□□□□□ -0.44
Retrieved 100 of 98,524 protein–RNA pairs in 26.2 ms