Protein–RNA interactions for Protein: Q7Z401

DENND4A, C-myc promoter-binding protein, humanhuman

Predictions only

Length 1,863 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DENND4AQ7Z401 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
DENND4AQ7Z401 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
DENND4AQ7Z401 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.5
DENND4AQ7Z401 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC18.21■□□□□ 0.5
DENND4AQ7Z401 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC18.21■□□□□ 0.5
DENND4AQ7Z401 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC18.21■□□□□ 0.5
DENND4AQ7Z401 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.5
DENND4AQ7Z401 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
DENND4AQ7Z401 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC18.2■□□□□ 0.5
DENND4AQ7Z401 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
DENND4AQ7Z401 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC18.2■□□□□ 0.5
DENND4AQ7Z401 PHGDH-209ENST00000641074 1780 ntBASIC18.2■□□□□ 0.5
DENND4AQ7Z401 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
DENND4AQ7Z401 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC18.2■□□□□ 0.5
DENND4AQ7Z401 KLK8-202ENST00000320838 456 ntTSL 5 BASIC18.2■□□□□ 0.5
DENND4AQ7Z401 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC18.2■□□□□ 0.5
DENND4AQ7Z401 STK19B-204ENST00000512515 211 ntBASIC18.2■□□□□ 0.5
DENND4AQ7Z401 CCND1-203ENST00000536559 553 ntTSL 3 BASIC18.2■□□□□ 0.5
DENND4AQ7Z401 AC138304.1-201ENST00000563841 424 ntTSL 3 BASIC18.2■□□□□ 0.5
DENND4AQ7Z401 AC109462.3-201ENST00000573934 613 ntBASIC18.2■□□□□ 0.5
DENND4AQ7Z401 OR7E47P-204ENST00000575924 449 ntBASIC18.2■□□□□ 0.5
DENND4AQ7Z401 AC022145.2-201ENST00000598203 171 ntBASIC18.2■□□□□ 0.5
DENND4AQ7Z401 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
DENND4AQ7Z401 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
DENND4AQ7Z401 AC018445.3-201ENST00000624177 1945 ntBASIC18.2■□□□□ 0.5
DENND4AQ7Z401 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC18.2■□□□□ 0.5
DENND4AQ7Z401 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC18.2■□□□□ 0.5
DENND4AQ7Z401 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
DENND4AQ7Z401 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
DENND4AQ7Z401 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
DENND4AQ7Z401 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC18.2■□□□□ 0.5
DENND4AQ7Z401 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC18.2■□□□□ 0.5
DENND4AQ7Z401 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
DENND4AQ7Z401 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC18.2■□□□□ 0.5
DENND4AQ7Z401 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
DENND4AQ7Z401 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC18.2■□□□□ 0.5
DENND4AQ7Z401 BCRP1-201ENST00000444246 691 ntBASIC18.2■□□□□ 0.5
DENND4AQ7Z401 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC18.2■□□□□ 0.5
DENND4AQ7Z401 C5orf66-202ENST00000507641 547 ntTSL 3 BASIC18.2■□□□□ 0.5
DENND4AQ7Z401 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC18.2■□□□□ 0.5
DENND4AQ7Z401 AC109322.1-201ENST00000524499 1264 ntBASIC18.2■□□□□ 0.5
DENND4AQ7Z401 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC18.2■□□□□ 0.5
DENND4AQ7Z401 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC18.2■□□□□ 0.5
DENND4AQ7Z401 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
DENND4AQ7Z401 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC18.2■□□□□ 0.5
DENND4AQ7Z401 METTL23-205ENST00000588302 925 ntTSL 5 BASIC18.2■□□□□ 0.5
DENND4AQ7Z401 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC18.2■□□□□ 0.5
DENND4AQ7Z401 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
DENND4AQ7Z401 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC18.19■□□□□ 0.5
DENND4AQ7Z401 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
DENND4AQ7Z401 AC009336.1-201ENST00000608941 1553 ntBASIC18.19■□□□□ 0.5
DENND4AQ7Z401 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC18.19■□□□□ 0.5
DENND4AQ7Z401 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
DENND4AQ7Z401 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
DENND4AQ7Z401 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
DENND4AQ7Z401 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
DENND4AQ7Z401 AC004461.1-201ENST00000412461 403 ntBASIC18.19■□□□□ 0.5
DENND4AQ7Z401 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC18.19■□□□□ 0.5
DENND4AQ7Z401 GGTLC5P-201ENST00000617623 998 ntBASIC18.19■□□□□ 0.5
DENND4AQ7Z401 AC009093.7-201ENST00000623853 1223 ntBASIC18.19■□□□□ 0.5
DENND4AQ7Z401 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC18.19■□□□□ 0.5
DENND4AQ7Z401 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC18.19■□□□□ 0.5
DENND4AQ7Z401 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
DENND4AQ7Z401 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
DENND4AQ7Z401 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
DENND4AQ7Z401 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC18.19■□□□□ 0.5
DENND4AQ7Z401 GNPTAB-201ENST00000299314 5701 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
DENND4AQ7Z401 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
DENND4AQ7Z401 AC126763.1-201ENST00000552015 2118 ntBASIC18.18■□□□□ 0.5
DENND4AQ7Z401 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
DENND4AQ7Z401 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC18.18■□□□□ 0.5
DENND4AQ7Z401 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC18.18■□□□□ 0.5
DENND4AQ7Z401 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
DENND4AQ7Z401 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
DENND4AQ7Z401 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
DENND4AQ7Z401 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
DENND4AQ7Z401 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC18.18■□□□□ 0.5
DENND4AQ7Z401 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC18.18■□□□□ 0.5
DENND4AQ7Z401 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC18.18■□□□□ 0.5
DENND4AQ7Z401 AL513210.1-201ENST00000629608 234 ntBASIC18.18■□□□□ 0.5
DENND4AQ7Z401 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC18.18■□□□□ 0.5
DENND4AQ7Z401 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
DENND4AQ7Z401 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC18.18■□□□□ 0.5
DENND4AQ7Z401 AC073592.3-201ENST00000625118 1834 ntBASIC18.18■□□□□ 0.5
DENND4AQ7Z401 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
DENND4AQ7Z401 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC18.18■□□□□ 0.5
DENND4AQ7Z401 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
DENND4AQ7Z401 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
DENND4AQ7Z401 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
DENND4AQ7Z401 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
DENND4AQ7Z401 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
DENND4AQ7Z401 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC18.18■□□□□ 0.5
DENND4AQ7Z401 BCAR1-209ENST00000546196 1340 ntBASIC18.18■□□□□ 0.5
DENND4AQ7Z401 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
DENND4AQ7Z401 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
DENND4AQ7Z401 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
DENND4AQ7Z401 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
DENND4AQ7Z401 SIGLEC30P-201ENST00000455569 941 ntBASIC18.18■□□□□ 0.5
DENND4AQ7Z401 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC18.18■□□□□ 0.5
DENND4AQ7Z401 SMN2-210ENST00000511812 867 ntTSL 2 BASIC18.18■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 47.7 ms