Protein–RNA interactions for Protein: Q7Z3D4

LYSMD3, LysM and putative peptidoglycan-binding domain-containing protein 3, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3Q7Z3D4 HLA-DQB1-201ENST00000374943 1656 ntBASIC17.94■□□□□ 0.46
LYSMD3Q7Z3D4 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
LYSMD3Q7Z3D4 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
LYSMD3Q7Z3D4 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
LYSMD3Q7Z3D4 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC17.94■□□□□ 0.46
LYSMD3Q7Z3D4 PPIH-202ENST00000372549 327 ntTSL 3 BASIC17.94■□□□□ 0.46
LYSMD3Q7Z3D4 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
LYSMD3Q7Z3D4 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC17.94■□□□□ 0.46
LYSMD3Q7Z3D4 AC091607.1-201ENST00000490318 1060 ntBASIC17.94■□□□□ 0.46
LYSMD3Q7Z3D4 CIB2-208ENST00000560618 804 ntTSL 2 BASIC17.94■□□□□ 0.46
LYSMD3Q7Z3D4 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC17.94■□□□□ 0.46
LYSMD3Q7Z3D4 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
LYSMD3Q7Z3D4 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC17.94■□□□□ 0.46
LYSMD3Q7Z3D4 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC17.94■□□□□ 0.46
LYSMD3Q7Z3D4 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
LYSMD3Q7Z3D4 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC17.94■□□□□ 0.46
LYSMD3Q7Z3D4 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC17.94■□□□□ 0.46
LYSMD3Q7Z3D4 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
LYSMD3Q7Z3D4 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
LYSMD3Q7Z3D4 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC17.94■□□□□ 0.46
LYSMD3Q7Z3D4 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC17.94■□□□□ 0.46
LYSMD3Q7Z3D4 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC17.94■□□□□ 0.46
LYSMD3Q7Z3D4 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC17.94■□□□□ 0.46
LYSMD3Q7Z3D4 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC17.94■□□□□ 0.46
LYSMD3Q7Z3D4 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
LYSMD3Q7Z3D4 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
LYSMD3Q7Z3D4 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
LYSMD3Q7Z3D4 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
LYSMD3Q7Z3D4 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
LYSMD3Q7Z3D4 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
LYSMD3Q7Z3D4 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
LYSMD3Q7Z3D4 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
LYSMD3Q7Z3D4 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC17.93■□□□□ 0.46
LYSMD3Q7Z3D4 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
LYSMD3Q7Z3D4 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
LYSMD3Q7Z3D4 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
LYSMD3Q7Z3D4 DRAXINP1-201ENST00000437611 948 ntBASIC17.93■□□□□ 0.46
LYSMD3Q7Z3D4 HCG4P8-203ENST00000443049 980 ntBASIC17.93■□□□□ 0.46
LYSMD3Q7Z3D4 LINC00265-3P-201ENST00000447588 903 ntBASIC17.93■□□□□ 0.46
LYSMD3Q7Z3D4 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC17.93■□□□□ 0.46
LYSMD3Q7Z3D4 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC17.93■□□□□ 0.46
LYSMD3Q7Z3D4 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
LYSMD3Q7Z3D4 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC17.93■□□□□ 0.46
LYSMD3Q7Z3D4 AC011840.4-201ENST00000578471 627 ntBASIC17.93■□□□□ 0.46
LYSMD3Q7Z3D4 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC17.93■□□□□ 0.46
LYSMD3Q7Z3D4 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
LYSMD3Q7Z3D4 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC17.93■□□□□ 0.46
LYSMD3Q7Z3D4 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC17.93■□□□□ 0.46
LYSMD3Q7Z3D4 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
LYSMD3Q7Z3D4 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
LYSMD3Q7Z3D4 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC17.93■□□□□ 0.46
LYSMD3Q7Z3D4 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
LYSMD3Q7Z3D4 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
LYSMD3Q7Z3D4 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
LYSMD3Q7Z3D4 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
LYSMD3Q7Z3D4 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
LYSMD3Q7Z3D4 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC17.92■□□□□ 0.46
LYSMD3Q7Z3D4 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC17.92■□□□□ 0.46
LYSMD3Q7Z3D4 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
LYSMD3Q7Z3D4 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
LYSMD3Q7Z3D4 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC17.92■□□□□ 0.46
LYSMD3Q7Z3D4 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC17.92■□□□□ 0.46
LYSMD3Q7Z3D4 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
LYSMD3Q7Z3D4 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC17.92■□□□□ 0.46
LYSMD3Q7Z3D4 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
LYSMD3Q7Z3D4 AC012313.1-201ENST00000593393 3059 ntBASIC17.92■□□□□ 0.46
LYSMD3Q7Z3D4 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
LYSMD3Q7Z3D4 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
LYSMD3Q7Z3D4 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
LYSMD3Q7Z3D4 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
LYSMD3Q7Z3D4 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
LYSMD3Q7Z3D4 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC17.92■□□□□ 0.46
LYSMD3Q7Z3D4 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
LYSMD3Q7Z3D4 TOB2P1-201ENST00000469761 992 ntBASIC17.92■□□□□ 0.46
LYSMD3Q7Z3D4 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC17.92■□□□□ 0.46
LYSMD3Q7Z3D4 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
LYSMD3Q7Z3D4 KRT18P56-201ENST00000507275 550 ntBASIC17.92■□□□□ 0.46
LYSMD3Q7Z3D4 MPI-205ENST00000562606 1052 ntTSL 3 BASIC17.92■□□□□ 0.46
LYSMD3Q7Z3D4 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC17.92■□□□□ 0.46
LYSMD3Q7Z3D4 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC17.92■□□□□ 0.46
LYSMD3Q7Z3D4 IL11-204ENST00000590625 1028 ntTSL 2 BASIC17.92■□□□□ 0.46
LYSMD3Q7Z3D4 AL353801.3-201ENST00000609898 542 ntBASIC17.92■□□□□ 0.46
LYSMD3Q7Z3D4 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC17.92■□□□□ 0.46
LYSMD3Q7Z3D4 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
LYSMD3Q7Z3D4 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
LYSMD3Q7Z3D4 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
LYSMD3Q7Z3D4 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
LYSMD3Q7Z3D4 AC008764.6-201ENST00000595909 2069 ntBASIC17.92■□□□□ 0.46
LYSMD3Q7Z3D4 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
LYSMD3Q7Z3D4 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
LYSMD3Q7Z3D4 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
LYSMD3Q7Z3D4 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
LYSMD3Q7Z3D4 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC17.92■□□□□ 0.46
LYSMD3Q7Z3D4 BCL2-203ENST00000589955 5011 ntBASIC17.92■□□□□ 0.46
LYSMD3Q7Z3D4 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC17.91■□□□□ 0.46
LYSMD3Q7Z3D4 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
LYSMD3Q7Z3D4 AC233702.3-201ENST00000578656 1387 ntBASIC17.91■□□□□ 0.46
LYSMD3Q7Z3D4 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
LYSMD3Q7Z3D4 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
LYSMD3Q7Z3D4 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 22.9 ms