Protein–RNA interactions for Protein: Q6ZS62

COLCA1, Colorectal cancer-associated protein 1, humanhuman

Predictions only

Length 124 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA1Q6ZS62 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC15.35■□□□□ 0.05
COLCA1Q6ZS62 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
COLCA1Q6ZS62 AC125634.1-201ENST00000438758 1403 ntBASIC15.35■□□□□ 0.05
COLCA1Q6ZS62 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC15.35■□□□□ 0.05
COLCA1Q6ZS62 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
COLCA1Q6ZS62 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
COLCA1Q6ZS62 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
COLCA1Q6ZS62 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC15.35■□□□□ 0.05
COLCA1Q6ZS62 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
COLCA1Q6ZS62 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC15.35■□□□□ 0.05
COLCA1Q6ZS62 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
COLCA1Q6ZS62 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
COLCA1Q6ZS62 TBC1D3P5-201ENST00000579401 1545 ntBASIC15.35■□□□□ 0.05
COLCA1Q6ZS62 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
COLCA1Q6ZS62 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC15.35■□□□□ 0.05
COLCA1Q6ZS62 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC15.35■□□□□ 0.05
COLCA1Q6ZS62 COX5BP2-201ENST00000392354 334 ntBASIC15.35■□□□□ 0.05
COLCA1Q6ZS62 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
COLCA1Q6ZS62 KRT18P35-201ENST00000510488 1269 ntBASIC15.35■□□□□ 0.05
COLCA1Q6ZS62 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC15.35■□□□□ 0.05
COLCA1Q6ZS62 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
COLCA1Q6ZS62 RMI2-205ENST00000576027 818 ntTSL 2 BASIC15.35■□□□□ 0.05
COLCA1Q6ZS62 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC15.35■□□□□ 0.05
COLCA1Q6ZS62 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC15.35■□□□□ 0.05
COLCA1Q6ZS62 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
COLCA1Q6ZS62 AP000550.4-202ENST00000639755 178 ntBASIC15.35■□□□□ 0.05
COLCA1Q6ZS62 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
COLCA1Q6ZS62 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC15.35■□□□□ 0.05
COLCA1Q6ZS62 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
COLCA1Q6ZS62 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC15.35■□□□□ 0.05
COLCA1Q6ZS62 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
COLCA1Q6ZS62 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC15.35■□□□□ 0.05
COLCA1Q6ZS62 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC15.35■□□□□ 0.05
COLCA1Q6ZS62 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
COLCA1Q6ZS62 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
COLCA1Q6ZS62 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC15.35■□□□□ 0.05
COLCA1Q6ZS62 IER3-202ENST00000376377 1350 ntBASIC15.35■□□□□ 0.05
COLCA1Q6ZS62 AC026471.1-201ENST00000564629 3026 ntBASIC15.35■□□□□ 0.05
COLCA1Q6ZS62 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
COLCA1Q6ZS62 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
COLCA1Q6ZS62 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
COLCA1Q6ZS62 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC15.35■□□□□ 0.05
COLCA1Q6ZS62 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC15.35■□□□□ 0.05
COLCA1Q6ZS62 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
COLCA1Q6ZS62 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
COLCA1Q6ZS62 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
COLCA1Q6ZS62 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
COLCA1Q6ZS62 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC15.34■□□□□ 0.05
COLCA1Q6ZS62 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
COLCA1Q6ZS62 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
COLCA1Q6ZS62 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
COLCA1Q6ZS62 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC15.34■□□□□ 0.05
COLCA1Q6ZS62 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
COLCA1Q6ZS62 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
COLCA1Q6ZS62 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
COLCA1Q6ZS62 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
COLCA1Q6ZS62 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
COLCA1Q6ZS62 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
COLCA1Q6ZS62 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC15.34■□□□□ 0.05
COLCA1Q6ZS62 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
COLCA1Q6ZS62 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC15.34■□□□□ 0.05
COLCA1Q6ZS62 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
COLCA1Q6ZS62 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC15.34■□□□□ 0.05
COLCA1Q6ZS62 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC15.34■□□□□ 0.05
COLCA1Q6ZS62 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
COLCA1Q6ZS62 AC011840.4-201ENST00000578471 627 ntBASIC15.34■□□□□ 0.05
COLCA1Q6ZS62 AC005336.2-201ENST00000593183 939 ntBASIC15.34■□□□□ 0.05
COLCA1Q6ZS62 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC15.34■□□□□ 0.05
COLCA1Q6ZS62 AL138831.2-201ENST00000606564 490 ntBASIC15.34■□□□□ 0.05
COLCA1Q6ZS62 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
COLCA1Q6ZS62 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
COLCA1Q6ZS62 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC15.34■□□□□ 0.05
COLCA1Q6ZS62 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
COLCA1Q6ZS62 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC15.34■□□□□ 0.05
COLCA1Q6ZS62 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
COLCA1Q6ZS62 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.05
COLCA1Q6ZS62 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
COLCA1Q6ZS62 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
COLCA1Q6ZS62 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
COLCA1Q6ZS62 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.05
COLCA1Q6ZS62 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC15.33■□□□□ 0.05
COLCA1Q6ZS62 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.05
COLCA1Q6ZS62 AC010460.3-201ENST00000511359 1579 ntBASIC15.33■□□□□ 0.05
COLCA1Q6ZS62 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.05
COLCA1Q6ZS62 AL138688.1-201ENST00000624851 1594 ntBASIC15.33■□□□□ 0.05
COLCA1Q6ZS62 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC15.33■□□□□ 0.05
COLCA1Q6ZS62 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC15.33■□□□□ 0.04
COLCA1Q6ZS62 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
COLCA1Q6ZS62 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC15.33■□□□□ 0.04
COLCA1Q6ZS62 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
COLCA1Q6ZS62 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC15.33■□□□□ 0.04
COLCA1Q6ZS62 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
COLCA1Q6ZS62 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
COLCA1Q6ZS62 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
COLCA1Q6ZS62 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
COLCA1Q6ZS62 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
COLCA1Q6ZS62 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC15.33■□□□□ 0.04
COLCA1Q6ZS62 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
COLCA1Q6ZS62 TSSC2-201ENST00000450217 709 ntBASIC15.33■□□□□ 0.04
COLCA1Q6ZS62 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC15.33■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 26.1 ms