Protein–RNA interactions for Protein: Q6PIV2

FOXR1, Forkhead box protein R1, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXR1Q6PIV2 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
FOXR1Q6PIV2 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
FOXR1Q6PIV2 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC18.65■□□□□ 0.58
FOXR1Q6PIV2 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
FOXR1Q6PIV2 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
FOXR1Q6PIV2 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
FOXR1Q6PIV2 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
FOXR1Q6PIV2 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC18.65■□□□□ 0.58
FOXR1Q6PIV2 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
FOXR1Q6PIV2 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC18.65■□□□□ 0.58
FOXR1Q6PIV2 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC18.65■□□□□ 0.58
FOXR1Q6PIV2 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
FOXR1Q6PIV2 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
FOXR1Q6PIV2 GUK1-204ENST00000366721 689 ntTSL 3 BASIC18.65■□□□□ 0.58
FOXR1Q6PIV2 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
FOXR1Q6PIV2 MFAP1P1-201ENST00000442257 1255 ntBASIC18.65■□□□□ 0.58
FOXR1Q6PIV2 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
FOXR1Q6PIV2 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC18.65■□□□□ 0.58
FOXR1Q6PIV2 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC18.65■□□□□ 0.58
FOXR1Q6PIV2 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
FOXR1Q6PIV2 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC18.65■□□□□ 0.58
FOXR1Q6PIV2 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
FOXR1Q6PIV2 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC18.65■□□□□ 0.58
FOXR1Q6PIV2 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
FOXR1Q6PIV2 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
FOXR1Q6PIV2 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
FOXR1Q6PIV2 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC18.65■□□□□ 0.58
FOXR1Q6PIV2 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
FOXR1Q6PIV2 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
FOXR1Q6PIV2 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
FOXR1Q6PIV2 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
FOXR1Q6PIV2 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
FOXR1Q6PIV2 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
FOXR1Q6PIV2 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC18.65■□□□□ 0.58
FOXR1Q6PIV2 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
FOXR1Q6PIV2 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC18.65■□□□□ 0.58
FOXR1Q6PIV2 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC18.65■□□□□ 0.58
FOXR1Q6PIV2 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
FOXR1Q6PIV2 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
FOXR1Q6PIV2 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
FOXR1Q6PIV2 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC18.64■□□□□ 0.58
FOXR1Q6PIV2 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC18.64■□□□□ 0.57
FOXR1Q6PIV2 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC18.64■□□□□ 0.57
FOXR1Q6PIV2 AGGF1P2-201ENST00000426656 2106 ntBASIC18.64■□□□□ 0.57
FOXR1Q6PIV2 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
FOXR1Q6PIV2 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC18.64■□□□□ 0.57
FOXR1Q6PIV2 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
FOXR1Q6PIV2 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
FOXR1Q6PIV2 GBA2-202ENST00000378094 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
FOXR1Q6PIV2 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
FOXR1Q6PIV2 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
FOXR1Q6PIV2 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
FOXR1Q6PIV2 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
FOXR1Q6PIV2 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC18.64■□□□□ 0.57
FOXR1Q6PIV2 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC18.64■□□□□ 0.57
FOXR1Q6PIV2 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC18.64■□□□□ 0.57
FOXR1Q6PIV2 HMGA1P5-201ENST00000412453 271 ntBASIC18.64■□□□□ 0.57
FOXR1Q6PIV2 AC004951.3-201ENST00000418645 1148 ntBASIC18.64■□□□□ 0.57
FOXR1Q6PIV2 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC18.64■□□□□ 0.57
FOXR1Q6PIV2 AC117947.1-201ENST00000427448 529 ntBASIC18.64■□□□□ 0.57
FOXR1Q6PIV2 FAM207BP-201ENST00000447172 505 ntBASIC18.64■□□□□ 0.57
FOXR1Q6PIV2 AC092647.4-201ENST00000457211 535 ntBASIC18.64■□□□□ 0.57
FOXR1Q6PIV2 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC18.64■□□□□ 0.57
FOXR1Q6PIV2 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC18.64■□□□□ 0.57
FOXR1Q6PIV2 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC18.64■□□□□ 0.57
FOXR1Q6PIV2 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC18.64■□□□□ 0.57
FOXR1Q6PIV2 AC130371.2-201ENST00000619443 611 ntBASIC18.64■□□□□ 0.57
FOXR1Q6PIV2 AC116562.4-202ENST00000641738 218 ntBASIC18.64■□□□□ 0.57
FOXR1Q6PIV2 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
FOXR1Q6PIV2 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
FOXR1Q6PIV2 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
FOXR1Q6PIV2 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
FOXR1Q6PIV2 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
FOXR1Q6PIV2 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
FOXR1Q6PIV2 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC18.64■□□□□ 0.57
FOXR1Q6PIV2 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
FOXR1Q6PIV2 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC18.64■□□□□ 0.57
FOXR1Q6PIV2 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC18.64■□□□□ 0.57
FOXR1Q6PIV2 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
FOXR1Q6PIV2 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
FOXR1Q6PIV2 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
FOXR1Q6PIV2 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC18.63■□□□□ 0.57
FOXR1Q6PIV2 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
FOXR1Q6PIV2 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
FOXR1Q6PIV2 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
FOXR1Q6PIV2 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
FOXR1Q6PIV2 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC18.63■□□□□ 0.57
FOXR1Q6PIV2 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
FOXR1Q6PIV2 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
FOXR1Q6PIV2 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
FOXR1Q6PIV2 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
FOXR1Q6PIV2 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
FOXR1Q6PIV2 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC18.63■□□□□ 0.57
FOXR1Q6PIV2 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
FOXR1Q6PIV2 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
FOXR1Q6PIV2 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC18.63■□□□□ 0.57
FOXR1Q6PIV2 CCR12P-201ENST00000446203 998 ntBASIC18.63■□□□□ 0.57
FOXR1Q6PIV2 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC18.63■□□□□ 0.57
FOXR1Q6PIV2 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC18.63■□□□□ 0.57
FOXR1Q6PIV2 GPX4-207ENST00000589115 812 ntTSL 2 BASIC18.63■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 31.5 ms