Protein–RNA interactions for Protein: Q6PD62

CTR9, RNA polymerase-associated protein CTR9 homolog, humanhuman

Predictions only

Length 1,173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTR9Q6PD62 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC21.16■□□□□ 0.98
CTR9Q6PD62 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
CTR9Q6PD62 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CTR9Q6PD62 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC21.16■□□□□ 0.98
CTR9Q6PD62 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC21.16■□□□□ 0.98
CTR9Q6PD62 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
CTR9Q6PD62 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC21.16■□□□□ 0.98
CTR9Q6PD62 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
CTR9Q6PD62 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
CTR9Q6PD62 FUOM-202ENST00000368551 628 ntTSL 3 BASIC21.16■□□□□ 0.98
CTR9Q6PD62 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
CTR9Q6PD62 FDX1P1-201ENST00000449115 551 ntBASIC21.16■□□□□ 0.98
CTR9Q6PD62 AC009078.2-202ENST00000463353 338 ntBASIC21.16■□□□□ 0.98
CTR9Q6PD62 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC21.16■□□□□ 0.98
CTR9Q6PD62 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC21.16■□□□□ 0.98
CTR9Q6PD62 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC21.16■□□□□ 0.98
CTR9Q6PD62 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
CTR9Q6PD62 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC21.16■□□□□ 0.98
CTR9Q6PD62 AP001269.4-201ENST00000609611 512 ntBASIC21.16■□□□□ 0.98
CTR9Q6PD62 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC21.16■□□□□ 0.98
CTR9Q6PD62 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CTR9Q6PD62 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CTR9Q6PD62 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CTR9Q6PD62 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CTR9Q6PD62 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC21.16■□□□□ 0.98
CTR9Q6PD62 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CTR9Q6PD62 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC21.16■□□□□ 0.98
CTR9Q6PD62 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CTR9Q6PD62 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC21.16■□□□□ 0.98
CTR9Q6PD62 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC21.16■□□□□ 0.98
CTR9Q6PD62 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
CTR9Q6PD62 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC21.15■□□□□ 0.98
CTR9Q6PD62 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC21.15■□□□□ 0.98
CTR9Q6PD62 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CTR9Q6PD62 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
CTR9Q6PD62 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CTR9Q6PD62 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC21.15■□□□□ 0.98
CTR9Q6PD62 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
CTR9Q6PD62 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC21.15■□□□□ 0.98
CTR9Q6PD62 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CTR9Q6PD62 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
CTR9Q6PD62 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CTR9Q6PD62 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC21.15■□□□□ 0.98
CTR9Q6PD62 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC21.15■□□□□ 0.98
CTR9Q6PD62 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CTR9Q6PD62 VPS51-217ENST00000639871 243 ntTSL 5 BASIC21.15■□□□□ 0.98
CTR9Q6PD62 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC21.15■□□□□ 0.98
CTR9Q6PD62 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC21.15■□□□□ 0.98
CTR9Q6PD62 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
CTR9Q6PD62 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CTR9Q6PD62 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
CTR9Q6PD62 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CTR9Q6PD62 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CTR9Q6PD62 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
CTR9Q6PD62 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC21.14■□□□□ 0.98
CTR9Q6PD62 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC21.14■□□□□ 0.98
CTR9Q6PD62 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
CTR9Q6PD62 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC21.14■□□□□ 0.98
CTR9Q6PD62 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.98
CTR9Q6PD62 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
CTR9Q6PD62 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
CTR9Q6PD62 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.98
CTR9Q6PD62 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC21.14■□□□□ 0.98
CTR9Q6PD62 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC21.14■□□□□ 0.98
CTR9Q6PD62 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
CTR9Q6PD62 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC21.14■□□□□ 0.97
CTR9Q6PD62 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC21.14■□□□□ 0.97
CTR9Q6PD62 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
CTR9Q6PD62 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC21.14■□□□□ 0.97
CTR9Q6PD62 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC21.14■□□□□ 0.97
CTR9Q6PD62 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
CTR9Q6PD62 FAM220CP-201ENST00000395253 831 ntBASIC21.14■□□□□ 0.97
CTR9Q6PD62 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC21.14■□□□□ 0.97
CTR9Q6PD62 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC21.14■□□□□ 0.97
CTR9Q6PD62 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC21.14■□□□□ 0.97
CTR9Q6PD62 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC21.14■□□□□ 0.97
CTR9Q6PD62 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
CTR9Q6PD62 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
CTR9Q6PD62 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
CTR9Q6PD62 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
CTR9Q6PD62 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC21.14■□□□□ 0.97
CTR9Q6PD62 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
CTR9Q6PD62 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
CTR9Q6PD62 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC21.14■□□□□ 0.97
CTR9Q6PD62 FLJ13224-201ENST00000313737 1514 ntBASIC21.14■□□□□ 0.97
CTR9Q6PD62 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC21.14■□□□□ 0.97
CTR9Q6PD62 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
CTR9Q6PD62 MED29-202ENST00000594368 1471 ntTSL 2 BASIC21.13■□□□□ 0.97
CTR9Q6PD62 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CTR9Q6PD62 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CTR9Q6PD62 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CTR9Q6PD62 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC21.13■□□□□ 0.97
CTR9Q6PD62 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CTR9Q6PD62 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CTR9Q6PD62 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC21.13■□□□□ 0.97
CTR9Q6PD62 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CTR9Q6PD62 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
CTR9Q6PD62 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CTR9Q6PD62 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CTR9Q6PD62 RBSN-204ENST00000449050 903 ntTSL 2 BASIC21.13■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 25.4 ms