Protein–RNA interactions for Protein: Q6NUK4

REEP3, Receptor expression-enhancing protein 3, humanhuman

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
REEP3Q6NUK4 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
REEP3Q6NUK4 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
REEP3Q6NUK4 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
REEP3Q6NUK4 AC009949.1-201ENST00000623048 1830 ntBASIC16.66■□□□□ 0.26
REEP3Q6NUK4 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
REEP3Q6NUK4 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
REEP3Q6NUK4 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
REEP3Q6NUK4 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
REEP3Q6NUK4 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
REEP3Q6NUK4 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC16.65■□□□□ 0.26
REEP3Q6NUK4 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC16.65■□□□□ 0.26
REEP3Q6NUK4 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC16.65■□□□□ 0.26
REEP3Q6NUK4 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC16.65■□□□□ 0.26
REEP3Q6NUK4 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC16.65■□□□□ 0.26
REEP3Q6NUK4 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
REEP3Q6NUK4 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC16.65■□□□□ 0.26
REEP3Q6NUK4 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
REEP3Q6NUK4 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
REEP3Q6NUK4 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
REEP3Q6NUK4 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC16.65■□□□□ 0.26
REEP3Q6NUK4 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC16.65■□□□□ 0.26
REEP3Q6NUK4 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
REEP3Q6NUK4 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
REEP3Q6NUK4 KRT18P65-201ENST00000439811 1286 ntBASIC16.65■□□□□ 0.26
REEP3Q6NUK4 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC16.65■□□□□ 0.26
REEP3Q6NUK4 TMA16-209ENST00000513272 803 ntTSL 2 BASIC16.65■□□□□ 0.26
REEP3Q6NUK4 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
REEP3Q6NUK4 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC16.65■□□□□ 0.26
REEP3Q6NUK4 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC16.65■□□□□ 0.26
REEP3Q6NUK4 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC16.65■□□□□ 0.26
REEP3Q6NUK4 AC024563.2-201ENST00000603282 481 ntBASIC16.65■□□□□ 0.26
REEP3Q6NUK4 LINC01451-201ENST00000623792 534 ntBASIC16.65■□□□□ 0.26
REEP3Q6NUK4 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
REEP3Q6NUK4 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC16.65■□□□□ 0.26
REEP3Q6NUK4 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC16.65■□□□□ 0.26
REEP3Q6NUK4 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
REEP3Q6NUK4 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC16.65■□□□□ 0.26
REEP3Q6NUK4 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC16.65■□□□□ 0.26
REEP3Q6NUK4 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC16.65■□□□□ 0.26
REEP3Q6NUK4 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
REEP3Q6NUK4 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC16.65■□□□□ 0.26
REEP3Q6NUK4 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC16.65■□□□□ 0.26
REEP3Q6NUK4 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
REEP3Q6NUK4 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC16.65■□□□□ 0.26
REEP3Q6NUK4 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
REEP3Q6NUK4 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
REEP3Q6NUK4 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
REEP3Q6NUK4 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
REEP3Q6NUK4 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC16.64■□□□□ 0.25
REEP3Q6NUK4 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
REEP3Q6NUK4 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
REEP3Q6NUK4 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
REEP3Q6NUK4 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC16.64■□□□□ 0.25
REEP3Q6NUK4 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC16.64■□□□□ 0.25
REEP3Q6NUK4 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC16.64■□□□□ 0.25
REEP3Q6NUK4 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC16.64■□□□□ 0.25
REEP3Q6NUK4 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
REEP3Q6NUK4 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
REEP3Q6NUK4 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
REEP3Q6NUK4 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
REEP3Q6NUK4 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
REEP3Q6NUK4 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
REEP3Q6NUK4 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC16.64■□□□□ 0.25
REEP3Q6NUK4 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC16.64■□□□□ 0.25
REEP3Q6NUK4 HES2-202ENST00000377836 507 ntTSL 2 BASIC16.64■□□□□ 0.25
REEP3Q6NUK4 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
REEP3Q6NUK4 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC16.64■□□□□ 0.25
REEP3Q6NUK4 DDX43P3-201ENST00000441064 443 ntBASIC16.64■□□□□ 0.25
REEP3Q6NUK4 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC16.64■□□□□ 0.25
REEP3Q6NUK4 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC16.64■□□□□ 0.25
REEP3Q6NUK4 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
REEP3Q6NUK4 CD81-212ENST00000526072 1172 ntTSL 5 BASIC16.64■□□□□ 0.25
REEP3Q6NUK4 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC16.64■□□□□ 0.25
REEP3Q6NUK4 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC16.64■□□□□ 0.25
REEP3Q6NUK4 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC16.64■□□□□ 0.25
REEP3Q6NUK4 GCSHP2-201ENST00000560971 527 ntBASIC16.64■□□□□ 0.25
REEP3Q6NUK4 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC16.64■□□□□ 0.25
REEP3Q6NUK4 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC16.64■□□□□ 0.25
REEP3Q6NUK4 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
REEP3Q6NUK4 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
REEP3Q6NUK4 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
REEP3Q6NUK4 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
REEP3Q6NUK4 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC16.64■□□□□ 0.25
REEP3Q6NUK4 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
REEP3Q6NUK4 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC16.64■□□□□ 0.25
REEP3Q6NUK4 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC16.64■□□□□ 0.25
REEP3Q6NUK4 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
REEP3Q6NUK4 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
REEP3Q6NUK4 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
REEP3Q6NUK4 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
REEP3Q6NUK4 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC16.64■□□□□ 0.25
REEP3Q6NUK4 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC16.64■□□□□ 0.25
REEP3Q6NUK4 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
REEP3Q6NUK4 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC16.63■□□□□ 0.25
REEP3Q6NUK4 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC16.63■□□□□ 0.25
REEP3Q6NUK4 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
REEP3Q6NUK4 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
REEP3Q6NUK4 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
REEP3Q6NUK4 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
REEP3Q6NUK4 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 28.2 ms