Protein–RNA interactions for Protein: Q6ISU1

PTCRA, Pre T-cell antigen receptor alpha, humanhuman

Predicted RBP Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCRAQ6ISU1 CXCL1P1-201ENST00000502804 216 ntBASIC18.27■□□□□ 0.52
PTCRAQ6ISU1 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC18.27■□□□□ 0.52
PTCRAQ6ISU1 AC112191.1-201ENST00000523689 701 ntBASIC18.27■□□□□ 0.52
PTCRAQ6ISU1 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC18.27■□□□□ 0.52
PTCRAQ6ISU1 AL359881.2-201ENST00000602973 570 ntBASIC18.27■□□□□ 0.52
PTCRAQ6ISU1 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC18.27■□□□□ 0.52
PTCRAQ6ISU1 FKBP4-208ENST00000630279 156 ntTSL 5 BASIC18.27■□□□□ 0.52
PTCRAQ6ISU1 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
PTCRAQ6ISU1 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
PTCRAQ6ISU1 AC132938.6-201ENST00000623828 1655 ntBASIC18.27■□□□□ 0.52
PTCRAQ6ISU1 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC18.27■□□□□ 0.52
PTCRAQ6ISU1 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC18.27■□□□□ 0.51
PTCRAQ6ISU1 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
PTCRAQ6ISU1 AL157384.1-201ENST00000445995 2473 ntBASIC18.27■□□□□ 0.51
PTCRAQ6ISU1 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC18.27■□□□□ 0.51
PTCRAQ6ISU1 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC18.27■□□□□ 0.51
PTCRAQ6ISU1 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC18.27■□□□□ 0.51
PTCRAQ6ISU1 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.51
PTCRAQ6ISU1 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC18.27■□□□□ 0.51
PTCRAQ6ISU1 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC18.27■□□□□ 0.51
PTCRAQ6ISU1 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.51
PTCRAQ6ISU1 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC18.27■□□□□ 0.51
PTCRAQ6ISU1 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
PTCRAQ6ISU1 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
PTCRAQ6ISU1 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC18.26■□□□□ 0.51
PTCRAQ6ISU1 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
PTCRAQ6ISU1 AC006116.8-202ENST00000587620 1550 ntBASIC18.26■□□□□ 0.51
PTCRAQ6ISU1 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC18.26■□□□□ 0.51
PTCRAQ6ISU1 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
PTCRAQ6ISU1 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
PTCRAQ6ISU1 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC18.26■□□□□ 0.51
PTCRAQ6ISU1 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
PTCRAQ6ISU1 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
PTCRAQ6ISU1 AC003669.1-201ENST00000334569 611 ntBASIC18.26■□□□□ 0.51
PTCRAQ6ISU1 CENPM-205ENST00000404067 905 ntTSL 3 BASIC18.26■□□□□ 0.51
PTCRAQ6ISU1 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
PTCRAQ6ISU1 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC18.26■□□□□ 0.51
PTCRAQ6ISU1 AC005237.2-201ENST00000434368 219 ntBASIC18.26■□□□□ 0.51
PTCRAQ6ISU1 UGT1A2P-201ENST00000454886 866 ntBASIC18.26■□□□□ 0.51
PTCRAQ6ISU1 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC18.26■□□□□ 0.51
PTCRAQ6ISU1 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC18.26■□□□□ 0.51
PTCRAQ6ISU1 AC051619.7-201ENST00000568314 623 ntBASIC18.26■□□□□ 0.51
PTCRAQ6ISU1 IGHV3OR16-6-201ENST00000568775 360 ntBASIC18.26■□□□□ 0.51
PTCRAQ6ISU1 COX11-202ENST00000571584 1108 ntTSL 2 BASIC18.26■□□□□ 0.51
PTCRAQ6ISU1 GABARAP-205ENST00000573928 476 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
PTCRAQ6ISU1 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC18.26■□□□□ 0.51
PTCRAQ6ISU1 SNHG28-203ENST00000621242 708 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
PTCRAQ6ISU1 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC18.26■□□□□ 0.51
PTCRAQ6ISU1 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC18.26■□□□□ 0.51
PTCRAQ6ISU1 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
PTCRAQ6ISU1 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
PTCRAQ6ISU1 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC18.26■□□□□ 0.51
PTCRAQ6ISU1 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
PTCRAQ6ISU1 AC092919.2-201ENST00000623631 1645 ntBASIC18.26■□□□□ 0.51
PTCRAQ6ISU1 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
PTCRAQ6ISU1 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
PTCRAQ6ISU1 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
PTCRAQ6ISU1 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
PTCRAQ6ISU1 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC18.26■□□□□ 0.51
PTCRAQ6ISU1 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
PTCRAQ6ISU1 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
PTCRAQ6ISU1 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
PTCRAQ6ISU1 CKS1B-202ENST00000368436 820 ntTSL 2 BASIC18.25■□□□□ 0.51
PTCRAQ6ISU1 FAM159B-201ENST00000389074 847 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
PTCRAQ6ISU1 BLCAP-202ENST00000397131 633 ntAPPRIS P1 TSL 3 BASIC18.25■□□□□ 0.51
PTCRAQ6ISU1 BLCAP-203ENST00000397134 566 ntAPPRIS P1 TSL 4 BASIC18.25■□□□□ 0.51
PTCRAQ6ISU1 FAM207CP-201ENST00000443486 507 ntBASIC18.25■□□□□ 0.51
PTCRAQ6ISU1 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
PTCRAQ6ISU1 LINC02560-201ENST00000596379 459 ntBASIC18.25■□□□□ 0.51
PTCRAQ6ISU1 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC18.25■□□□□ 0.51
PTCRAQ6ISU1 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
PTCRAQ6ISU1 AC008761.3-201ENST00000624803 892 ntBASIC18.25■□□□□ 0.51
PTCRAQ6ISU1 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC18.25■□□□□ 0.51
PTCRAQ6ISU1 SERF2-217ENST00000630046 862 ntTSL 5 BASIC18.25■□□□□ 0.51
PTCRAQ6ISU1 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
PTCRAQ6ISU1 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
PTCRAQ6ISU1 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
PTCRAQ6ISU1 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
PTCRAQ6ISU1 AL049757.1-201ENST00000616842 1596 ntBASIC18.25■□□□□ 0.51
PTCRAQ6ISU1 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
PTCRAQ6ISU1 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
PTCRAQ6ISU1 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
PTCRAQ6ISU1 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
PTCRAQ6ISU1 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
PTCRAQ6ISU1 FUT8-AS1-201ENST00000621019 1521 ntBASIC18.24■□□□□ 0.51
PTCRAQ6ISU1 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
PTCRAQ6ISU1 ADH5P3-201ENST00000433842 1137 ntBASIC18.24■□□□□ 0.51
PTCRAQ6ISU1 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
PTCRAQ6ISU1 MRPL36-204ENST00000508987 686 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
PTCRAQ6ISU1 AP005018.1-201ENST00000525475 301 ntBASIC18.24■□□□□ 0.51
PTCRAQ6ISU1 AC067852.1-201ENST00000585572 594 ntTSL 4 BASIC18.24■□□□□ 0.51
PTCRAQ6ISU1 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
PTCRAQ6ISU1 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
PTCRAQ6ISU1 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
PTCRAQ6ISU1 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
PTCRAQ6ISU1 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC18.24■□□□□ 0.51
PTCRAQ6ISU1 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
PTCRAQ6ISU1 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
PTCRAQ6ISU1 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
PTCRAQ6ISU1 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 42.3 ms