Protein–RNA interactions for Protein: Q6DN03

HIST2H2BC, Putative histone H2B type 2-C, humanhuman

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST2H2BCQ6DN03 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
HIST2H2BCQ6DN03 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
HIST2H2BCQ6DN03 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
HIST2H2BCQ6DN03 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
HIST2H2BCQ6DN03 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC15.18■□□□□ 0.02
HIST2H2BCQ6DN03 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC15.17■□□□□ 0.02
HIST2H2BCQ6DN03 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC15.17■□□□□ 0.02
HIST2H2BCQ6DN03 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
HIST2H2BCQ6DN03 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
HIST2H2BCQ6DN03 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
HIST2H2BCQ6DN03 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC15.17■□□□□ 0.02
HIST2H2BCQ6DN03 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC15.17■□□□□ 0.02
HIST2H2BCQ6DN03 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC15.17■□□□□ 0.02
HIST2H2BCQ6DN03 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC15.17■□□□□ 0.02
HIST2H2BCQ6DN03 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
HIST2H2BCQ6DN03 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
HIST2H2BCQ6DN03 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
HIST2H2BCQ6DN03 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
HIST2H2BCQ6DN03 RHOC-206ENST00000369637 888 ntAPPRIS P1 TSL 3 BASIC15.17■□□□□ 0.02
HIST2H2BCQ6DN03 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
HIST2H2BCQ6DN03 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC15.17■□□□□ 0.02
HIST2H2BCQ6DN03 FLG-AS1-204ENST00000420707 906 ntTSL 5 BASIC15.17■□□□□ 0.02
HIST2H2BCQ6DN03 STMN1-204ENST00000426559 948 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
HIST2H2BCQ6DN03 RPS2P32-201ENST00000439199 892 ntBASIC15.17■□□□□ 0.02
HIST2H2BCQ6DN03 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC15.17■□□□□ 0.02
HIST2H2BCQ6DN03 CXCL1P1-201ENST00000502804 216 ntBASIC15.17■□□□□ 0.02
HIST2H2BCQ6DN03 LINC00824-206ENST00000523173 920 ntTSL 2 BASIC15.17■□□□□ 0.02
HIST2H2BCQ6DN03 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC15.17■□□□□ 0.02
HIST2H2BCQ6DN03 AC140878.1-201ENST00000565277 250 ntBASIC15.17■□□□□ 0.02
HIST2H2BCQ6DN03 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
HIST2H2BCQ6DN03 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC15.17■□□□□ 0.02
HIST2H2BCQ6DN03 AL353135.1-201ENST00000606729 504 ntBASIC15.17■□□□□ 0.02
HIST2H2BCQ6DN03 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC15.17■□□□□ 0.02
HIST2H2BCQ6DN03 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC15.17■□□□□ 0.02
HIST2H2BCQ6DN03 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC15.17■□□□□ 0.02
HIST2H2BCQ6DN03 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
HIST2H2BCQ6DN03 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
HIST2H2BCQ6DN03 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC15.17■□□□□ 0.02
HIST2H2BCQ6DN03 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC15.17■□□□□ 0.02
HIST2H2BCQ6DN03 AC132938.5-201ENST00000624980 1813 ntBASIC15.17■□□□□ 0.02
HIST2H2BCQ6DN03 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
HIST2H2BCQ6DN03 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
HIST2H2BCQ6DN03 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
HIST2H2BCQ6DN03 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
HIST2H2BCQ6DN03 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
HIST2H2BCQ6DN03 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
HIST2H2BCQ6DN03 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
HIST2H2BCQ6DN03 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
HIST2H2BCQ6DN03 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
HIST2H2BCQ6DN03 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
HIST2H2BCQ6DN03 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
HIST2H2BCQ6DN03 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
HIST2H2BCQ6DN03 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
HIST2H2BCQ6DN03 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
HIST2H2BCQ6DN03 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
HIST2H2BCQ6DN03 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
HIST2H2BCQ6DN03 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
HIST2H2BCQ6DN03 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
HIST2H2BCQ6DN03 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
HIST2H2BCQ6DN03 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
HIST2H2BCQ6DN03 FIBP-201ENST00000338369 1261 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
HIST2H2BCQ6DN03 ADM2-201ENST00000395737 535 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
HIST2H2BCQ6DN03 ZFAND2B-203ENST00000409206 1159 ntTSL 2 BASIC15.16■□□□□ 0.02
HIST2H2BCQ6DN03 PIN1P1-201ENST00000412108 996 ntBASIC15.16■□□□□ 0.02
HIST2H2BCQ6DN03 AL355306.1-201ENST00000415580 579 ntBASIC15.16■□□□□ 0.02
HIST2H2BCQ6DN03 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC15.16■□□□□ 0.02
HIST2H2BCQ6DN03 AL031283.3-201ENST00000439788 727 ntTSL 3 BASIC15.16■□□□□ 0.02
HIST2H2BCQ6DN03 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
HIST2H2BCQ6DN03 GALT-202ENST00000450095 1280 ntTSL 2 BASIC15.16■□□□□ 0.02
HIST2H2BCQ6DN03 AL354710.2-201ENST00000468244 550 ntTSL 4 BASIC15.16■□□□□ 0.02
HIST2H2BCQ6DN03 AC083973.1-206ENST00000518213 815 ntTSL 3 BASIC15.16■□□□□ 0.02
HIST2H2BCQ6DN03 AC112191.1-201ENST00000523689 701 ntBASIC15.16■□□□□ 0.02
HIST2H2BCQ6DN03 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC15.16■□□□□ 0.02
HIST2H2BCQ6DN03 AP003385.5-201ENST00000533876 555 ntTSL 4 BASIC15.16■□□□□ 0.02
HIST2H2BCQ6DN03 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC15.16■□□□□ 0.02
HIST2H2BCQ6DN03 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC15.16■□□□□ 0.02
HIST2H2BCQ6DN03 AP001059.3-201ENST00000619053 235 ntBASIC15.16■□□□□ 0.02
HIST2H2BCQ6DN03 DBI-211ENST00000627093 554 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
HIST2H2BCQ6DN03 PRF1-203ENST00000638674 1080 ntTSL 5 BASIC15.16■□□□□ 0.02
HIST2H2BCQ6DN03 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
HIST2H2BCQ6DN03 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC15.16■□□□□ 0.02
HIST2H2BCQ6DN03 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
HIST2H2BCQ6DN03 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
HIST2H2BCQ6DN03 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
HIST2H2BCQ6DN03 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
HIST2H2BCQ6DN03 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC15.16■□□□□ 0.02
HIST2H2BCQ6DN03 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC15.16■□□□□ 0.02
HIST2H2BCQ6DN03 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
HIST2H2BCQ6DN03 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC15.16■□□□□ 0.02
HIST2H2BCQ6DN03 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
HIST2H2BCQ6DN03 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
HIST2H2BCQ6DN03 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC15.16■□□□□ 0.02
HIST2H2BCQ6DN03 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
HIST2H2BCQ6DN03 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC15.15■□□□□ 0.02
HIST2H2BCQ6DN03 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
HIST2H2BCQ6DN03 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC15.15■□□□□ 0.02
HIST2H2BCQ6DN03 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
HIST2H2BCQ6DN03 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC15.15■□□□□ 0.02
HIST2H2BCQ6DN03 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC15.15■□□□□ 0.02
HIST2H2BCQ6DN03 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 49.5 ms