Protein–RNA interactions for Protein: Q5XG99

LYSMD4, LysM and putative peptidoglycan-binding domain-containing protein 4, humanhuman

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD4Q5XG99 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
LYSMD4Q5XG99 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC17.43■□□□□ 0.38
LYSMD4Q5XG99 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
LYSMD4Q5XG99 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC17.43■□□□□ 0.38
LYSMD4Q5XG99 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC17.43■□□□□ 0.38
LYSMD4Q5XG99 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC17.43■□□□□ 0.38
LYSMD4Q5XG99 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
LYSMD4Q5XG99 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC17.43■□□□□ 0.38
LYSMD4Q5XG99 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC17.43■□□□□ 0.38
LYSMD4Q5XG99 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
LYSMD4Q5XG99 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
LYSMD4Q5XG99 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC17.43■□□□□ 0.38
LYSMD4Q5XG99 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
LYSMD4Q5XG99 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC17.43■□□□□ 0.38
LYSMD4Q5XG99 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC17.43■□□□□ 0.38
LYSMD4Q5XG99 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC17.43■□□□□ 0.38
LYSMD4Q5XG99 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC17.43■□□□□ 0.38
LYSMD4Q5XG99 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC17.43■□□□□ 0.38
LYSMD4Q5XG99 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC17.43■□□□□ 0.38
LYSMD4Q5XG99 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
LYSMD4Q5XG99 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC17.43■□□□□ 0.38
LYSMD4Q5XG99 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC17.43■□□□□ 0.38
LYSMD4Q5XG99 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC17.43■□□□□ 0.38
LYSMD4Q5XG99 ORC5-208ENST00000626700 344 ntTSL 3 BASIC17.43■□□□□ 0.38
LYSMD4Q5XG99 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
LYSMD4Q5XG99 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
LYSMD4Q5XG99 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC17.43■□□□□ 0.38
LYSMD4Q5XG99 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
LYSMD4Q5XG99 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
LYSMD4Q5XG99 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
LYSMD4Q5XG99 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
LYSMD4Q5XG99 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
LYSMD4Q5XG99 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
LYSMD4Q5XG99 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
LYSMD4Q5XG99 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC17.42■□□□□ 0.38
LYSMD4Q5XG99 AL049757.1-201ENST00000616842 1596 ntBASIC17.42■□□□□ 0.38
LYSMD4Q5XG99 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
LYSMD4Q5XG99 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
LYSMD4Q5XG99 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
LYSMD4Q5XG99 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
LYSMD4Q5XG99 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
LYSMD4Q5XG99 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
LYSMD4Q5XG99 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
LYSMD4Q5XG99 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC17.42■□□□□ 0.38
LYSMD4Q5XG99 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC17.42■□□□□ 0.38
LYSMD4Q5XG99 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC17.42■□□□□ 0.38
LYSMD4Q5XG99 OST4-202ENST00000447619 458 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
LYSMD4Q5XG99 DUTP2-201ENST00000519164 463 ntBASIC17.42■□□□□ 0.38
LYSMD4Q5XG99 CCND1-203ENST00000536559 553 ntTSL 3 BASIC17.42■□□□□ 0.38
LYSMD4Q5XG99 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC17.42■□□□□ 0.38
LYSMD4Q5XG99 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC17.42■□□□□ 0.38
LYSMD4Q5XG99 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC17.42■□□□□ 0.38
LYSMD4Q5XG99 AC010654.1-201ENST00000615722 808 ntBASIC17.42■□□□□ 0.38
LYSMD4Q5XG99 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
LYSMD4Q5XG99 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
LYSMD4Q5XG99 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
LYSMD4Q5XG99 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC17.42■□□□□ 0.38
LYSMD4Q5XG99 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
LYSMD4Q5XG99 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
LYSMD4Q5XG99 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
LYSMD4Q5XG99 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC17.42■□□□□ 0.38
LYSMD4Q5XG99 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
LYSMD4Q5XG99 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC17.42■□□□□ 0.38
LYSMD4Q5XG99 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
LYSMD4Q5XG99 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC17.42■□□□□ 0.38
LYSMD4Q5XG99 FUT8-AS1-201ENST00000621019 1521 ntBASIC17.42■□□□□ 0.38
LYSMD4Q5XG99 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
LYSMD4Q5XG99 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
LYSMD4Q5XG99 GID4-202ENST00000376345 1391 ntTSL 3 BASIC17.41■□□□□ 0.38
LYSMD4Q5XG99 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
LYSMD4Q5XG99 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
LYSMD4Q5XG99 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
LYSMD4Q5XG99 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
LYSMD4Q5XG99 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
LYSMD4Q5XG99 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
LYSMD4Q5XG99 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC17.41■□□□□ 0.38
LYSMD4Q5XG99 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC17.41■□□□□ 0.38
LYSMD4Q5XG99 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
LYSMD4Q5XG99 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
LYSMD4Q5XG99 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
LYSMD4Q5XG99 MRPL20P1-201ENST00000400819 433 ntBASIC17.41■□□□□ 0.38
LYSMD4Q5XG99 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC17.41■□□□□ 0.38
LYSMD4Q5XG99 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC17.41■□□□□ 0.38
LYSMD4Q5XG99 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
LYSMD4Q5XG99 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC17.41■□□□□ 0.38
LYSMD4Q5XG99 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC17.41■□□□□ 0.38
LYSMD4Q5XG99 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC17.41■□□□□ 0.38
LYSMD4Q5XG99 AC106028.4-201ENST00000614509 607 ntBASIC17.41■□□□□ 0.38
LYSMD4Q5XG99 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC17.41■□□□□ 0.38
LYSMD4Q5XG99 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC17.41■□□□□ 0.38
LYSMD4Q5XG99 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC17.41■□□□□ 0.38
LYSMD4Q5XG99 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
LYSMD4Q5XG99 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC17.41■□□□□ 0.38
LYSMD4Q5XG99 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC17.41■□□□□ 0.38
LYSMD4Q5XG99 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
LYSMD4Q5XG99 PHGDH-209ENST00000641074 1780 ntBASIC17.4■□□□□ 0.38
LYSMD4Q5XG99 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
LYSMD4Q5XG99 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
LYSMD4Q5XG99 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
LYSMD4Q5XG99 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 28.9 ms