Protein–RNA interactions for Protein: Q52LC2

ATP6AP1L, V-type proton ATPase subunit S1-like protein, humanhuman

Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP6AP1LQ52LC2 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
ATP6AP1LQ52LC2 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
ATP6AP1LQ52LC2 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC17.28■□□□□ 0.36
ATP6AP1LQ52LC2 PVRIG2P-201ENST00000435460 978 ntBASIC17.28■□□□□ 0.36
ATP6AP1LQ52LC2 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC17.28■□□□□ 0.36
ATP6AP1LQ52LC2 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC17.28■□□□□ 0.36
ATP6AP1LQ52LC2 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC17.28■□□□□ 0.36
ATP6AP1LQ52LC2 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
ATP6AP1LQ52LC2 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC17.28■□□□□ 0.36
ATP6AP1LQ52LC2 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC17.28■□□□□ 0.36
ATP6AP1LQ52LC2 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC17.28■□□□□ 0.36
ATP6AP1LQ52LC2 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC17.28■□□□□ 0.36
ATP6AP1LQ52LC2 GPX4-207ENST00000589115 812 ntTSL 2 BASIC17.28■□□□□ 0.36
ATP6AP1LQ52LC2 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC17.28■□□□□ 0.36
ATP6AP1LQ52LC2 AC116407.2-201ENST00000613639 860 ntBASIC17.28■□□□□ 0.36
ATP6AP1LQ52LC2 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
ATP6AP1LQ52LC2 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
ATP6AP1LQ52LC2 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC17.28■□□□□ 0.36
ATP6AP1LQ52LC2 LINC00167-201ENST00000530583 1419 ntBASIC17.28■□□□□ 0.36
ATP6AP1LQ52LC2 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC17.28■□□□□ 0.36
ATP6AP1LQ52LC2 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
ATP6AP1LQ52LC2 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
ATP6AP1LQ52LC2 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC17.28■□□□□ 0.36
ATP6AP1LQ52LC2 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
ATP6AP1LQ52LC2 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC17.28■□□□□ 0.36
ATP6AP1LQ52LC2 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
ATP6AP1LQ52LC2 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC17.28■□□□□ 0.36
ATP6AP1LQ52LC2 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
ATP6AP1LQ52LC2 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
ATP6AP1LQ52LC2 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
ATP6AP1LQ52LC2 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
ATP6AP1LQ52LC2 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
ATP6AP1LQ52LC2 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
ATP6AP1LQ52LC2 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC17.27■□□□□ 0.36
ATP6AP1LQ52LC2 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
ATP6AP1LQ52LC2 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
ATP6AP1LQ52LC2 AC009053.2-201ENST00000563701 2365 ntBASIC17.27■□□□□ 0.36
ATP6AP1LQ52LC2 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
ATP6AP1LQ52LC2 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
ATP6AP1LQ52LC2 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
ATP6AP1LQ52LC2 Telomerase-vert.1-201ENST00000363312 438 ntBASIC17.27■□□□□ 0.36
ATP6AP1LQ52LC2 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC17.27■□□□□ 0.36
ATP6AP1LQ52LC2 AP000523.1-201ENST00000398242 1049 ntBASIC17.27■□□□□ 0.36
ATP6AP1LQ52LC2 HMGA1P5-201ENST00000412453 271 ntBASIC17.27■□□□□ 0.36
ATP6AP1LQ52LC2 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC17.27■□□□□ 0.36
ATP6AP1LQ52LC2 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC17.27■□□□□ 0.36
ATP6AP1LQ52LC2 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC17.27■□□□□ 0.36
ATP6AP1LQ52LC2 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC17.27■□□□□ 0.36
ATP6AP1LQ52LC2 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC17.27■□□□□ 0.36
ATP6AP1LQ52LC2 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC17.27■□□□□ 0.36
ATP6AP1LQ52LC2 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC17.27■□□□□ 0.36
ATP6AP1LQ52LC2 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
ATP6AP1LQ52LC2 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
ATP6AP1LQ52LC2 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
ATP6AP1LQ52LC2 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
ATP6AP1LQ52LC2 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
ATP6AP1LQ52LC2 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC17.27■□□□□ 0.35
ATP6AP1LQ52LC2 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC17.27■□□□□ 0.35
ATP6AP1LQ52LC2 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
ATP6AP1LQ52LC2 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC17.27■□□□□ 0.35
ATP6AP1LQ52LC2 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
ATP6AP1LQ52LC2 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC17.27■□□□□ 0.35
ATP6AP1LQ52LC2 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
ATP6AP1LQ52LC2 LINC00602-201ENST00000629776 2065 ntBASIC17.27■□□□□ 0.35
ATP6AP1LQ52LC2 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.35
ATP6AP1LQ52LC2 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC17.26■□□□□ 0.35
ATP6AP1LQ52LC2 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
ATP6AP1LQ52LC2 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
ATP6AP1LQ52LC2 AC080080.1-201ENST00000625121 2420 ntBASIC17.26■□□□□ 0.35
ATP6AP1LQ52LC2 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC17.26■□□□□ 0.35
ATP6AP1LQ52LC2 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
ATP6AP1LQ52LC2 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
ATP6AP1LQ52LC2 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
ATP6AP1LQ52LC2 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
ATP6AP1LQ52LC2 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
ATP6AP1LQ52LC2 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC17.26■□□□□ 0.35
ATP6AP1LQ52LC2 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC17.26■□□□□ 0.35
ATP6AP1LQ52LC2 AC010947.1-201ENST00000623454 693 ntBASIC17.26■□□□□ 0.35
ATP6AP1LQ52LC2 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC17.26■□□□□ 0.35
ATP6AP1LQ52LC2 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
ATP6AP1LQ52LC2 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
ATP6AP1LQ52LC2 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
ATP6AP1LQ52LC2 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
ATP6AP1LQ52LC2 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC17.26■□□□□ 0.35
ATP6AP1LQ52LC2 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC17.26■□□□□ 0.35
ATP6AP1LQ52LC2 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
ATP6AP1LQ52LC2 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
ATP6AP1LQ52LC2 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
ATP6AP1LQ52LC2 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
ATP6AP1LQ52LC2 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
ATP6AP1LQ52LC2 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
ATP6AP1LQ52LC2 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
ATP6AP1LQ52LC2 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC17.25■□□□□ 0.35
ATP6AP1LQ52LC2 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC17.25■□□□□ 0.35
ATP6AP1LQ52LC2 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
ATP6AP1LQ52LC2 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC17.25■□□□□ 0.35
ATP6AP1LQ52LC2 ORAI2-205ENST00000478730 5531 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
ATP6AP1LQ52LC2 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
ATP6AP1LQ52LC2 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
ATP6AP1LQ52LC2 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 32.6 ms