Protein–RNA interactions for Protein: Q495M9

USH1G, Usher syndrome type-1G protein, humanhuman

Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH1GQ495M9 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC20.45■□□□□ 0.86
USH1GQ495M9 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
USH1GQ495M9 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
USH1GQ495M9 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
USH1GQ495M9 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC20.45■□□□□ 0.86
USH1GQ495M9 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC20.45■□□□□ 0.86
USH1GQ495M9 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC20.45■□□□□ 0.86
USH1GQ495M9 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
USH1GQ495M9 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC20.45■□□□□ 0.86
USH1GQ495M9 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
USH1GQ495M9 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC20.45■□□□□ 0.86
USH1GQ495M9 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
USH1GQ495M9 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC20.45■□□□□ 0.86
USH1GQ495M9 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC20.45■□□□□ 0.86
USH1GQ495M9 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC20.45■□□□□ 0.86
USH1GQ495M9 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC20.45■□□□□ 0.86
USH1GQ495M9 AL020996.1-203ENST00000536896 2307 ntBASIC20.45■□□□□ 0.86
USH1GQ495M9 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC20.45■□□□□ 0.86
USH1GQ495M9 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC20.45■□□□□ 0.86
USH1GQ495M9 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
USH1GQ495M9 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC20.45■□□□□ 0.86
USH1GQ495M9 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC20.45■□□□□ 0.86
USH1GQ495M9 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
USH1GQ495M9 PAN3-AS1-201ENST00000563843 1351 ntBASIC20.45■□□□□ 0.86
USH1GQ495M9 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
USH1GQ495M9 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC20.44■□□□□ 0.86
USH1GQ495M9 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
USH1GQ495M9 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
USH1GQ495M9 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC20.44■□□□□ 0.86
USH1GQ495M9 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC20.44■□□□□ 0.86
USH1GQ495M9 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
USH1GQ495M9 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
USH1GQ495M9 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC20.44■□□□□ 0.86
USH1GQ495M9 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC20.44■□□□□ 0.86
USH1GQ495M9 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
USH1GQ495M9 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
USH1GQ495M9 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC20.44■□□□□ 0.86
USH1GQ495M9 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
USH1GQ495M9 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC20.44■□□□□ 0.86
USH1GQ495M9 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC20.44■□□□□ 0.86
USH1GQ495M9 HIST2H3DP1-201ENST00000401004 416 ntBASIC20.44■□□□□ 0.86
USH1GQ495M9 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC20.44■□□□□ 0.86
USH1GQ495M9 KRT18P67-201ENST00000432816 1264 ntBASIC20.44■□□□□ 0.86
USH1GQ495M9 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
USH1GQ495M9 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
USH1GQ495M9 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC20.44■□□□□ 0.86
USH1GQ495M9 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC20.44■□□□□ 0.86
USH1GQ495M9 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
USH1GQ495M9 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC20.44■□□□□ 0.86
USH1GQ495M9 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
USH1GQ495M9 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
USH1GQ495M9 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC20.44■□□□□ 0.86
USH1GQ495M9 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC20.44■□□□□ 0.86
USH1GQ495M9 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
USH1GQ495M9 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
USH1GQ495M9 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC20.44■□□□□ 0.86
USH1GQ495M9 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC20.44■□□□□ 0.86
USH1GQ495M9 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
USH1GQ495M9 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
USH1GQ495M9 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC20.44■□□□□ 0.86
USH1GQ495M9 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
USH1GQ495M9 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
USH1GQ495M9 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
USH1GQ495M9 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
USH1GQ495M9 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
USH1GQ495M9 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC20.43■□□□□ 0.86
USH1GQ495M9 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
USH1GQ495M9 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC20.43■□□□□ 0.86
USH1GQ495M9 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
USH1GQ495M9 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
USH1GQ495M9 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
USH1GQ495M9 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
USH1GQ495M9 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
USH1GQ495M9 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
USH1GQ495M9 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC20.43■□□□□ 0.86
USH1GQ495M9 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
USH1GQ495M9 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
USH1GQ495M9 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
USH1GQ495M9 MED22-202ENST00000371999 987 ntTSL 3 BASIC20.43■□□□□ 0.86
USH1GQ495M9 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC20.43■□□□□ 0.86
USH1GQ495M9 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
USH1GQ495M9 AP000347.1-202ENST00000435868 847 ntBASIC20.43■□□□□ 0.86
USH1GQ495M9 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC20.43■□□□□ 0.86
USH1GQ495M9 AF186996.4-201ENST00000467186 377 ntBASIC20.43■□□□□ 0.86
USH1GQ495M9 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC20.43■□□□□ 0.86
USH1GQ495M9 PENK-208ENST00000523051 772 ntTSL 5 BASIC20.43■□□□□ 0.86
USH1GQ495M9 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC20.43■□□□□ 0.86
USH1GQ495M9 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
USH1GQ495M9 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
USH1GQ495M9 AL773604.1-201ENST00000617417 272 ntBASIC20.43■□□□□ 0.86
USH1GQ495M9 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC20.43■□□□□ 0.86
USH1GQ495M9 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC20.43■□□□□ 0.86
USH1GQ495M9 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
USH1GQ495M9 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC20.43■□□□□ 0.86
USH1GQ495M9 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
USH1GQ495M9 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
USH1GQ495M9 AC009949.1-201ENST00000623048 1830 ntBASIC20.43■□□□□ 0.86
USH1GQ495M9 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
USH1GQ495M9 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
USH1GQ495M9 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 36.6 ms